KEGG T01015: 4331236

Oryza sativa japonica (Japanese rice): 4331236

Entry

4331236           CDS       T01015

Symbol

OsJ_08977, OsRPA32, OsRPA32-1, OsRPA32A, RPA2A, RPA32A

Name

(RefSeq) replication protein A 32 kDa subunit A

K10739

replication factor A2

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03030

DNA replication

osa03420

Nucleotide excision repair

osa03430

Mismatch repair

osa03440

Homologous recombination

osa03460

Fanconi anemia pathway

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4331236 (OsJ_08977)
   03420 Nucleotide excision repair
    4331236 (OsJ_08977)
   03430 Mismatch repair
    4331236 (OsJ_08977)
   03440 Homologous recombination
    4331236 (OsJ_08977)
   03460 Fanconi anemia pathway
    4331236 (OsJ_08977)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4331236 (OsJ_08977)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4331236 (OsJ_08977)
DNA replication proteins [BR:osa03032]
Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    4331236 (OsJ_08977)
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     4331236 (OsJ_08977)
   MMR (mismatch excision repair)
     4331236 (OsJ_08977)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     4331236 (OsJ_08977)

SSDB

Motif

Pfam:

RPA_C tRNA_anti-codon RMI2 Sfi1_C

Other DBs

NCBI-GeneID:

4331236

NCBI-ProteinID:

NP_001404035

LinkDB

Position

2:complement(join(36138950..36139034,36139148..36139216,36139582..36139664,36139745..36139840,36139966..36140044,36140126..36140203,36140340..36140381,36140786..36140883,36140979..36141098,36141191..36141280))

AA seq 279 aa
MMSFSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAP
FVVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGM
YVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAM
GSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEI
VKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFNE

NT seq 840 nt +upstreamnt +downstreamnt
atgatgtccttcagccagcccgacgccttctcgccgtcgcagttcacctcctcccagaat
gccgccgccgactctaccaccccttccaagagccggggcgcatcgagcaccatgccgctc
accgtgaagcagatctctgaagcgcagcaatctggcatcaccggggagaagggcgctccc
ttcgtcgtcgacggcgtcgagacagccaacgttaggcttgtgggattggtcagtggcaag
acggagcggaacaccgatgtgtccttcacgatcgacgatggcaccggccgcctcgatttc
atcagatgggtcaatgatggtgctgattctgctgaaaccgctgctgttcagaatggaatg
tatgtttctgtcattggtagcctcaaggggcttcaggagaggaagcgtgctactgctttc
gctatcaggcctgtaactgattataatgaggtcacactgcatttcattcagtgcgtgcga
atgcatttagagaacaccaaatcacagattggtagccctgcaaaaacatattctgccatg
ggatcctcatcttccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaac
ccggcaccagtgctcagtgtaacaaatggatcaaaaactgatttgaacacagaagtgctg
aatgttttccgcgaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatc
gtgaagcgcttcaggctaccggaggccaagatcaaggtagctattgattacctcgctgac
attgggcacatatactcaacaatcgacgagtctcactacaagtcagcgttcaatgaataa

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