Oryza sativa japonica (Japanese rice): 4331238
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Entry
4331238 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4331238
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
4331238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
4331238
NCBI-ProteinID:
XP_015625512
UniProt:
Q0DW68
Q6K9U0
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All DBs
Position
2:join(36155636..36157039,36157167..36157606,36157692..36159135)
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AA seq
1095 aa
AA seq
DB search
MDRPPPPPASLSPQEWEQLIDDFPTPRRHRWLHLPLLDLALSSLPRRDLPSHLRPLLLSF
LDDHLLPPSPTHLPLLLSSLLSFPSDHPLRDHLLLTVTSAFASALSLPVSTDHADPLSAL
VNALLASANRPNHAPDRAARALACDALRALDAALPGLLADVLGHVYALAAAERSPAAQSY
LLLLASAARHVVRLGRLPSTTSILAVSGPPTPFFVPAHLLAPAPDPANPVPPPSEVNLRD
IRKVLALIMDRPQVLTPASGMEMAAILAEVSAAVVGWAPAIAAHVKVQFGGMAHSSSLML
LHSLLTLFIQFPDAFGAEDERKMARRLALAACEAHRPLTARLLALHWLLGSGKFRYAVPG
LAKWFYPGVFDPLAVKAKKLDCLALVAAGVDADKIEGGRDVDQTIGLVDDGLACVSAFRW
LPGWSTETCVAFRALHVVLVAAAPHSTDGSGCSGAGELLNSTIFHHLQAMLVDMTSEHRG
LVPVIADFINRLLACNTHRWAGEQLLQTLDENLLPRLEPGYQLASYYPLFEKIAENETVP
QLRLIELLTKQMASLAKKHDPETELKTWSQGSKVVGICRVMMKHHHSSRIFFPLSCLLVL
TIKSYPDLEVRDHARICLRMLSCIPGKKLRHLMGIGEQPAGVTPSHPGPLFDVPSPRPAQ
DLKSMPDLASYIHLERVVPLVVKQSWALTLPNFSIQSRASGQILSIQDVSSTPPEQEKTP
QPTIERIAYTQEALRVMDSKGAETLEILRRHFACIPDYLHSVGLKIKIPCTFRFDSEPFN
HAWGSDSAVPGSEGVDGLPALYAATINFSSSAQFGKIPSCHVPFLLGEPPGSGMDIMPLD
NGHRLESSYCASVVIELEPREPSPGLIDVVITANTENCQVISGSIQPITVGIEDMFLKAS
VPPDILKEDAAEYYQDLFHALWEACNSCSNTGRETFPLTGGKGSAAINGTRSVKLLEVTP
KVLIRAIERYLAPFVVSVAGDSLITILRGNAIIKNVVWEESDSAPIVGADALVPYSVDTN
LSLQRIDEDEFEVGAETYAHLSKRDMGIVRVLIFLPPRYHLLFSMEVGYASTLVRIRTDH
WPCLAYVDEYLEALL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggaccggccgccgccgcctcccgcctccctctcgcctcaggagtgggagcagctcatc
gacgatttccccaccccgcgccgccaccgatggctccacctccccctcctcgacctcgcc
ctctcctccctcccgcgccgcgacctcccctcccacctcaggcccctcctcctctccttc
ctcgacgaccacctcctcccgccctcccccacccacctccccctccttctctcctccctc
ctctccttcccctccgaccacccgctccgggaccacctcctcctcaccgtcacatccgcc
ttcgcctccgcgctctcccttcccgtctccaccgaccacgccgaccccctctccgccctc
gtcaacgccctgctcgcctccgccaaccgccccaaccacgcacccgaccgcgccgcccgc
gccctcgcctgcgacgccctgcgcgccctcgacgccgcgctcccgggcctcctcgccgac
gtcctcggccacgtctacgctctcgccgccgccgagcgctcgccggccgcgcagtcctac
ctcctcctcctcgcctccgccgcccgccacgtcgtccgcctcggcaggctcccctccacc
acctccatcttggcggtgtccggcccgcccacccccttctttgtgcccgcgcatctcctc
gcacccgcaccagatcctgccaaccccgtgccgccgccttccgaggtgaatttgagggac
ataaggaaagtgctcgctctgatcatggacaggccgcaggtcctcacgcctgcatcgggc
atggagatggcggccatccttgcagaggtgtccgcggctgtggtcgggtgggctccggcg
atcgcagcgcacgtcaaggtgcagtttggcgggatggcacattcgtccagcctcatgctt
ctacactctctgctcacgctgttcatccagtttccagatgctttcggggccgaagacgag
cgtaaaatggcacgccgtctagctttggctgcttgtgaggcacaccgcccgctcacagcg
cgcttgctggcattacattggctgcttggatctggaaaattcagatatgcggtgcccggc
ctcgcgaaatggttttatcctggcgtgttcgacccccttgcagtcaaggccaagaagcta
gattgcctagctcttgttgctgctggcgttgatgctgacaagattgaaggaggcagagat
gtggaccagacaattgggcttgtcgatgatggcctggcttgtgtttcagccttcaggtgg
ctcccgggatggagtaccgagacttgtgtggcgttccgggcgctgcatgtggtcttggtt
gctgctgcccctcacagtactgatggctcaggttgctccggagctggtgagctcctgaat
tctactatcttccaccatttacaggctatgttggttgatatgacatcagaacatcgaggc
ttagtcccagtaattgctgatttcatcaaccgtcttctagcatgcaacactcatcggtgg
gcaggggagcagttgctgcaaacgcttgacgagaatctgcttccgaggcttgaaccaggc
taccaactggcgtcatactacccactctttgagaagatcgcagagaatgagacagttcct
cagctccgcctaatagagttgctcaccaagcagatggcttctcttgccaagaagcatgat
ccagagacagaactgaaaacatggtctcagggcagcaaggtcgttggcatttgtcgtgtc
atgatgaagcaccatcacagctctcgcatcttctttcccctctcatgcctacttgtactc
actatcaagtcctacccagacctggaggtccgggaccatgcaaggatttgtttgcggatg
ctgtcctgcattcctggaaagaagctgaggcatctcatgggaatcggagagcaacctgca
ggtgttacaccatctcatccaggtcctttgtttgatgtcccatcaccacgtcctgctcaa
gatcttaagagcatgcctgatttggcgtcttacattcatcttgaaagagttgtgccactg
gtcgtgaaacagtcttgggccctcacattgcctaacttcagcattcagagcagagcatct
ggccaaattctaagtatacaggatgtaagctcaactcctccggagcaagaaaagacacca
caacctaccatcgagagaatcgcctacacacaagaagctcttcgtgtgatggattctaag
ggtgctgaaacactggaaatccttaggaggcactttgcatgcattcctgactacctccac
tcagttggtctcaaaataaaaataccttgcacatttaggttcgattcagagccattcaac
catgcttggggatccgattcagcagttccaggttctgaaggggttgatggtttgccggcc
ctttatgcggcgacaattaacttttcatcaagtgcacagtttgggaaaattccctcatgt
catgtacctttccttctaggagaacctccaggttctggtatggacattatgcctttggat
aacggccaccggttagaatcaagttattgtgcttcagtagtgatagaattagagcctcga
gaaccatcacctggtcttattgatgttgtcatcaccgccaacacagagaattgccaagtc
atatctgggtccattcaacccattacagttggcattgaggacatgtttctgaaggccagt
gtacctcctgatattctgaaagaggatgcagctgagtattaccaggatctgttccatgcg
ctatgggaggcctgcaacagttgttcgaacacaggtcgggagaccttccctttgacagga
gggaaagggtcagctgcgattaatggaacacgatctgtcaaacttcttgaggtgactcca
aaggttttgatcagagctattgaaagatacctggctcccttcgttgtcagcgttgctgga
gattcacttattaccatcctaagaggcaatgcaattattaaaaacgttgtgtgggaagaa
agtgattcagctcctattgttggtgctgatgcattggttccatactcagtggacacaaac
ctttcgcttcagcgcattgatgaagacgaatttgaggttggcgcagagacttatgctcat
ctaagcaagagggatatgggcattgtgcgtgtcctaatatttctaccaccaaggtatcac
ctcctcttttcgatggaagtaggttatgcctccacattggtcagaataagaaccgatcat
tggccatgtttggcatatgtcgacgaatacttggaagcgttgctctaa
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