KEGG   Oryza sativa japonica (Japanese rice): 4331253
Entry
4331253           CDS       T01015                                 
Symbol
AGO1, AGO1C, OsAGO1, OsAGO1c, OsJ_08998
Name
(RefSeq) protein argonaute 1C
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4331253 (AGO1)
   03036 Chromosome and associated proteins [BR:osa03036]
    4331253 (AGO1)
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4331253 (AGO1)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    4331253 (AGO1)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     4331253 (AGO1)
   microRNA pathway
    RISC loading complex
     4331253 (AGO1)
SSDB
Motif
Pfam: Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid SURF2
Other DBs
NCBI-GeneID: 4331253
NCBI-ProteinID: NP_001410808
LinkDB
Position
2:complement(join(36260427..36260641,36260728..36260759,36260841..36260935,36261021..36261094,36261202..36261337,36261423..36261486,36261684..36261746,36261865..36262007,36262103..36262240,36262324..36262445,36262561..36262726,36262881..36263003,36263339..36263410,36263592..36263699,36263797..36263913,36264070..36264199,36264315..36264421,36265247..36265356,36265653..36265786,36265879..36266028,36266125..36266333,36266418..36266945))
AA seq 1011 aa
MASRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQQQQQQQGRGCRARGASPPPPPQ
QQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAIMEAPRPSELAQPSPTPPQ
EQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSIT
PEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDD
GSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPF
GRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQL
LNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTRELTFPVDEGG
TVKSVVQYFQETYGFAIQHTYLPCLTVQRLNYLPMEVCKIVEGQRYSKRLNQNQIRALLE
ETCQHPRDRERDIIKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKYNETGRE
KDCLPRVGQWNMMNKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQASGMDFAP
EPILPPLNAHPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEI
DLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFG
ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTV
SGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPK
VTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGT
SRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
DTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaaga
gggagagggagaggccgtgccgcccgatatgctcagcctcagcctcagcctcagcagcag
cagcagcagcaaggacgaggatgccgtgctagaggtgcctcgccgccgccgccgccgcag
cagcagcagcagcaacagccaaggtctactcctactcgtgctaccactgtcaccgtggct
tcctcttcatctaccacggccaccgcatcatcaagccctctagctcccgagctgcgccaa
gcaataatggaagctccccgtcccagtgagctcgctcaaccctcacccactccgcctcag
gaacaacctgtggatgccgctaccacgacgccgcaccatattccatcctcaagcaagtca
attaggtttcctttgcgcccggggaagggtaccattggcaccaggtgcatggtcaaggcc
aatcatttcttcgctcacctgcccaacaaggatcttcatcactacgatgtctccatcact
ccagaagttacatcacgcattgttaaccgagctgtgatcaaggagctggtaaatctgtac
aaggcatcttatctgggtgggaggctgcctgcatatgatggtagaaagagcttatacacg
gctggcccattgccgtttacttcacaggagtttcagatcactttacttgacgacgatgat
ggttctggttctgagaggcgacagaggactttccgagtagtaatcaagttcgccgcacgg
gccgaccttcaccggcttgagttgtttttagctgggaggcacgcagaagctccacaggag
gcactgcaagttcttgatattgtgctgcgagagctaccatcagcaagatatgcgccattt
ggacgttccttcttttcgccttacttgggtaggaggcaaccccttggtgagggattggaa
agctggcgtggattttaccagagcattcggcctactcagatgggcttatcactgaatatt
gatatgtcagctacagctttcattgagccgttacctgttattgattttgttgcacaacta
ttgaattctgacatccattcaaggccgctttctgatgccgaacgtgttaagatcaagaaa
gccttgagaggagtaaaggtggaagttacccaccgtggcaacatgaggcggaagtaccgg
atatctggtttgacaattcagccaactcgtgagctaacttttcctgttgatgaaggaggc
acagtgaagtcagttgtacagtactttcaagagacatatggctttgccatccaacacacc
taccttccatgccttacagttcagcgattaaattacctgcctatggaggtctgcaaaata
gtggaaggacagagatactccaagagattaaatcagaatcagataagagctcttttggag
gagacatgccaacacccacgtgatcgggagcgtgatattattaagatggttaaacataac
gcttatcaggatgatccttacgcaaaagagtttggcattaagataagtgatcgtctggca
tcagtagaggcacgaattttaccggctccacggcttaagtacaatgagactggtcgagag
aaggattgcttaccaagagttggtcaatggaatatgatgaacaagaaaatggtaaatggt
ggtaaagtcagaagctggatgtgcgtcaattttgcccgtaatgtgcaggaaagtgttgtt
cgtgggttctgccatgaacttgctctgatgtgtcaagcctcaggaatggatttcgctcca
gaacctattcttccaccactaaatgcacatccagatcaagtggagcgtgctctaaaagct
aggtatcatgatgcaatgaacgttcttggaccccagcgcagggaacttgatttgcttatt
gggatactacctgataacaatggctcgctttatggtgatttgaagcgcgtgtgtgaaata
gatcttggaatagtttcacaatgctgttgcacgaagcaggtgttcaaaatgaacaaacaa
attcttgcaaatcttgctctgaagataaatgtcaaggttgggggcaggaacactgtgctg
gtggatgctgtgtcaaggcgtattcctctggtaaccgacagacctacaattatatttggt
gctgatgttacccatcctcatcctggagaggacagcagtccctcaattgctgctgttgta
gcctcccaagattggcctgaggtgacaaagtatgctgggttggtttctgctcaagcccac
cgacaagagctgatagaagatctatataaaatctggcaggatccacagagaggaacagtt
agtggtggcatgatccgtgagctgcttatatccttcaaaagatcaactggtgagaagccc
cagcgaataatattttacagggatggcgttagtgaaggccaattttaccaagttctactt
tatgaattgaatgcaatccgaaaagcatgtgcctccctggagacaaattaccaaccaaag
gtgactttcattgtggttcagaaacgtcaccacacaagattatttgcacataatcacaac
gatcagaactcagttgacaggagcgggaacatactccctggtacggttgtagattcaaag
atctgtcatccaactgagtttgacttctacctgtgtagccatgctggcattaagggtact
agtcgtccagctcattatcatgtcttgtgggatgaaaacaacttcacagctgatgcattg
cagattcttaccaacaacctttgctacacctatgcaaggtgcactcgctctgtatcaatt
gttccacctgcttattatgctcatctggctgccttccgtgctcgtttctatatggaacca
gatacatctgacagcagctctgtcgttagtgggcctggtgtacgtgggccactttctggc
tcatcaacatcacgtactcgggcccctggtggtgcagctgttaagccacttcctgctctg
aaggatagtgtgaagagggtcatgttctactgctga

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