Oryza sativa japonica (Japanese rice) (RefSeq): 4331253
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Entry
4331253 CDS
T01015
Name
(RefSeq) protein argonaute 1C
KO
K11593
eukaryotic translation initiation factor 2C
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4331253
03036 Chromosome and associated proteins [BR:
osa03036
]
4331253
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
4331253
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
4331253
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
4331253
microRNA pathway
RISC loading complex
4331253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
SURF2
Motif
Other DBs
NCBI-GeneID:
4331253
NCBI-ProteinID:
XP_015626468
UniProt:
Q6K972
LinkDB
All DBs
Position
2:complement(35761145..35768424)
Genome browser
AA seq
1011 aa
AA seq
DB search
MASRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQQQQQQQGRGCRARGASPPPPPQ
QQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAIMEAPRPSELAQPSPTPPQ
EQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSIT
PEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDD
GSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPF
GRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQL
LNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTRELTFPVDEGG
TVKSVVQYFQETYGFAIQHTYLPCLTVQRLNYLPMEVCKIVEGQRYSKRLNQNQIRALLE
ETCQHPRDRERDIIKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKYNETGRE
KDCLPRVGQWNMMNKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQASGMDFAP
EPILPPLNAHPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEI
DLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFG
ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTV
SGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPK
VTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGT
SRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
DTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaaga
gggagagggagaggccgtgccgcccgatatgctcagcctcagcctcagcctcagcagcag
cagcagcagcaaggacgaggatgccgtgctagaggtgcctcgccgccgccgccgccgcag
cagcagcagcagcaacagccaaggtctactcctactcgtgctaccactgtcaccgtggct
tcctcttcatctaccacggccaccgcatcatcaagccctctagctcccgagctgcgccaa
gcaataatggaagctccccgtcccagtgagctcgctcaaccctcacccactccgcctcag
gaacaacctgtggatgccgctaccacgacgccgcaccatattccatcctcaagcaagtca
attaggtttcctttgcgcccggggaagggtaccattggcaccaggtgcatggtcaaggcc
aatcatttcttcgctcacctgcccaacaaggatcttcatcactacgatgtctccatcact
ccagaagttacatcacgcattgttaaccgagctgtgatcaaggagctggtaaatctgtac
aaggcatcttatctgggtgggaggctgcctgcatatgatggtagaaagagcttatacacg
gctggcccattgccgtttacttcacaggagtttcagatcactttacttgacgacgatgat
ggttctggttctgagaggcgacagaggactttccgagtagtaatcaagttcgccgcacgg
gccgaccttcaccggcttgagttgtttttagctgggaggcacgcagaagctccacaggag
gcactgcaagttcttgatattgtgctgcgagagctaccatcagcaagatatgcgccattt
ggacgttccttcttttcgccttacttgggtaggaggcaaccccttggtgagggattggaa
agctggcgtggattttaccagagcattcggcctactcagatgggcttatcactgaatatt
gatatgtcagctacagctttcattgagccgttacctgttattgattttgttgcacaacta
ttgaattctgacatccattcaaggccgctttctgatgccgaacgtgttaagatcaagaaa
gccttgagaggagtaaaggtggaagttacccaccgtggcaacatgaggcggaagtaccgg
atatctggtttgacaattcagccaactcgtgagctaacttttcctgttgatgaaggaggc
acagtgaagtcagttgtacagtactttcaagagacatatggctttgccatccaacacacc
taccttccatgccttacagttcagcgattaaattacctgcctatggaggtctgcaaaata
gtggaaggacagagatactccaagagattaaatcagaatcagataagagctcttttggag
gagacatgccaacacccacgtgatcgggagcgtgatattattaagatggttaaacataac
gcttatcaggatgatccttacgcaaaagagtttggcattaagataagtgatcgtctggca
tcagtagaggcacgaattttaccggctccacggcttaagtacaatgagactggtcgagag
aaggattgcttaccaagagttggtcaatggaatatgatgaacaagaaaatggtaaatggt
ggtaaagtcagaagctggatgtgcgtcaattttgcccgtaatgtgcaggaaagtgttgtt
cgtgggttctgccatgaacttgctctgatgtgtcaagcctcaggaatggatttcgctcca
gaacctattcttccaccactaaatgcacatccagatcaagtggagcgtgctctaaaagct
aggtatcatgatgcaatgaacgttcttggaccccagcgcagggaacttgatttgcttatt
gggatactacctgataacaatggctcgctttatggtgatttgaagcgcgtgtgtgaaata
gatcttggaatagtttcacaatgctgttgcacgaagcaggtgttcaaaatgaacaaacaa
attcttgcaaatcttgctctgaagataaatgtcaaggttgggggcaggaacactgtgctg
gtggatgctgtgtcaaggcgtattcctctggtaaccgacagacctacaattatatttggt
gctgatgttacccatcctcatcctggagaggacagcagtccctcaattgctgctgttgta
gcctcccaagattggcctgaggtgacaaagtatgctgggttggtttctgctcaagcccac
cgacaagagctgatagaagatctatataaaatctggcaggatccacagagaggaacagtt
agtggtggcatgatccgtgagctgcttatatccttcaaaagatcaactggtgagaagccc
cagcgaataatattttacagggatggcgttagtgaaggccaattttaccaagttctactt
tatgaattgaatgcaatccgaaaagcatgtgcctccctggagacaaattaccaaccaaag
gtgactttcattgtggttcagaaacgtcaccacacaagattatttgcacataatcacaac
gatcagaactcagttgacaggagcgggaacatactccctggtacggttgtagattcaaag
atctgtcatccaactgagtttgacttctacctgtgtagccatgctggcattaagggtact
agtcgtccagctcattatcatgtcttgtgggatgaaaacaacttcacagctgatgcattg
cagattcttaccaacaacctttgctacacctatgcaaggtgcactcgctctgtatcaatt
gttccacctgcttattatgctcatctggctgccttccgtgctcgtttctatatggaacca
gatacatctgacagcagctctgtcgttagtgggcctggtgtacgtgggccactttctggc
tcatcaacatcacgtactcgggcccctggtggtgcagctgttaagccacttcctgctctg
aaggatagtgtgaagagggtcatgttctactgctga
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