Oryza sativa japonica (Japanese rice): 4331584
Help
Entry
4331584 CDS
T01015
Name
(RefSeq) transcription factor WER
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4331584
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4331584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Roughex
TFIIA
FAM60A
Motif
Other DBs
NCBI-GeneID:
4331584
NCBI-ProteinID:
XP_015630196
UniProt:
Q10RX9
A0A8J8YPX5
LinkDB
All DBs
Position
3:complement(join(2350573..2351050,2351170..2351299,2351391..2351526))
Genome browser
AA seq
247 aa
AA seq
DB search
MDEIRSLMLQQGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWVN
YLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHFKKARPSR
RARAQLLHQYQLQQQQQHRQYLHSLNLLQQQQQQLQQQQQQQQQQMMLLQEQEQQSPQEE
AADDSMVMMMMNDLQSKERCCTAVSVVPDDCVLPADDDAIWDSLWRLVDGDGSCGEGSSG
GEYWATS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatcagaagcctgatgctgcagcaagggtggaggaagggcccgtggactgcg
ctggaggacaggctcctgaccgagtacgtgcagcagcacggcgaaggcagctggaactcc
gtggccaagctcacagggctgaggcgcagcgggaagagctgccggctgcggtgggtgaac
tatctcaggccggacctgaagcgggggaagatcacccccgacgaggagaccgtcatcctc
cagctgcacgccatgctcggcaacagatggtcggcgatcgcgcggtgcctgccggggagg
acggacaacgagatcaagaactactggaggacgcacttcaagaaggcgaggccgtcgcgg
cgtgcgcgggcgcagctgctgcaccagtaccagctccagcagcagcagcagcatcgccag
tatctccatagcctgaaccttctgcagcagcagcagcagcagcttcagcaacagcaacag
caacagcaacagcagatgatgttgctgcaggagcaggagcagcagagcccgcaggaggag
gcagctgacgattccatggtgatgatgatgatgaacgatctccagagcaaggagcgttgc
tgcacggcggtctcggtggtgcccgacgactgcgtgctccccgccgatgatgatgcgatc
tgggacagcctctggaggctcgtcgacggcgatggcagctgcggcgaaggctcgagcggg
ggcgagtactgggctactagctaa
DBGET
integrated database retrieval system
