KEGG   Oryza sativa japonica (Japanese rice): 4331593
Entry
4331593           CDS       T01015                                 
Name
(RefSeq) protein PIR
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4331593
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     4331593
   Factors involved in mRNA localization
    Other mRNA localization factors
     4331593
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 4331593
NCBI-ProteinID: XP_015631007
LinkDB
Position
3:join(2441752..2441805,2442812..2442884,2443133..2443197,2443331..2443408,2443923..2444042,2445064..2445134,2445851..2445943,2446285..2446354,2446719..2446783,2447284..2447479,2447601..2447752,2447978..2448071,2448388..2448600,2449484..2449695,2449944..2450085,2450467..2450635,2451093..2451169,2451436..2451606,2452138..2452214,2452342..2452444,2453109..2453228,2453344..2453487,2453869..2454018,2454441..2454584,2454859..2454946,2455715..2455842,2456372..2456576,2456886..2457058,2457217..2457435,2457533..2457727)
AA seq 1286 aa
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSTQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKMNRLLNIFKNDPVI
PAFPDLHLSPAAILKELSSYFQNFSSQTRLLTLPSPHEIPPRELQDYQRHYLILNHMGTI
RAEHDDFSIRFASAMNQMIILKSSDGADNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPCKEPPSDSQHGSTTFFDYEKVVRWNYTGEERRALLELIGYIKSIGLMMQRCD
TLVSEALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKGDP
EHNSLETEEMRQSTFYPRPVAPTAAQIHCLQFLICELVSGGNMRKPGGLFGNSGSGIPVE
DLKQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLV
EHVTETQDAGLLESVLIPFDLYNDSAQHALTCLKQRFLYDEIEAEVDLSFDLLVEKLNEI
IFTYYKSCAASTLLDSSFTYLCDDGEKYFVKPLRFDAIFKLRRVMVLGRTIDLRSLITQR
MNKLFRENIDFLLERFESGDLCGVVELQQLLDILELTHQSISKFLELDSYSLMLSEMQEN
LSLVSYSSRISSQIWNEMQTDFLPNFILCNTTQRFVRSLKGTHHSSQRSSASTGKAYFYC
GSHDLTMAYQGISGLYRDFFGIPHMFAVVKLLGSRSLPGIIRALLDHISSKITAMVPKIT
ALQEALPKSIGLLSFDGGIAGCQKIVHEILTWEAKSEVKTEVLHDLKEIGSALYWMSLLD
IVLRQIDTTQFMQSAPWLGLIPGNDGQVKHAYSDNTPFTTLLSAATNAVASSPACPNPSS
FLVMAKQAEAASLLYKSNLNSGSVLEYALAFTSAALDRHYSKWSATPKTGFIDITTSKDF
YRVFSGLQYSYLEESINPSRKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFLNVAE
VENATVSLYQYSDRNKSPNFLQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKIACAIK
PSGAPLHRMKFTNTVSAFETLPQRAT
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggccatccccgtcgaggaggccatcgccgccctctccaccttctccctcgaggatgag
caaccagatgtgcagggcttggctgtgctcctatcgagtgaaagatatgcaactaatagt
cctattgaatacagtgatgttgctgcttatcgtctgtcattaggagaagatacaaaagcg
atcaaccagctgaatactctgattcaagagggaaaagaaatggcttctttgctgtacaca
tatcgtagctgtgttaaagcgctacctcagctgcccgattcaatgaagcatagtcaagca
gatttgtaccttgaaacatatcaagttcttgacctggaaatgagccgcttacgtgaaatc
cagagatggcaagcatctgctgcttctaagttggcagctgatatgcagagattttctagg
cctgaaagactggttaatggacccacaataactcatttttggtctatgctgaagttgctt
gatgtccttgtgcagcttgatcatcttaagaatgcaaaagcaagtataccaaatgatttt
tcatggtacaagagaacatttactcaagtaagcacccagtggcaggatactgacactatg
agagaagagctggatgatcttcagatttttttgagcaccagatgggccatcttgttgaat
ttgcatgccgagatgtttcgaacaaatactgttgaggacattctacaggttcttatagta
ttttgtgtggaatcacttgagttagactttgctcttctttttcccgagcgccatactcta
cttcgtgttctcccagttttggttgttctagcaacttcttcagagaaagagagtgagtca
ctctataagagagtcaagatgaaccgtcttctcaatatttttaagaacgatccagttatt
ccagcgtttccagatctgcatctctctcctgctgcaattttgaaggagctatcatcgtat
tttcaaaatttttccagtcaaacccgtcttcttactcttccatctcctcatgaaatcccc
cctcgagagctacaagactatcagaggcattacttgattttgaaccacatgggaactatc
agagcagagcatgatgacttctctatacgttttgcctctgcaatgaaccagatgataata
ttgaagtcatcagatggtgcggataatgactggtcaagagatattaaggggaacatgtat
gatattgttgttgaaggctttcagcttcttagccgatggactggcaggatatgggagcag
tgtgcctggaaattttcgcgcccttgtaaagaaccaccttcagattctcaacatggatcg
acaacattttttgactatgaaaaggtagtacgctggaactacactggagaagaacggagg
gctcttcttgaattaattggttacataaaaagtattggattgatgatgcaacgctgtgac
accttagtgtctgaagccttatgggaaacgatacacatggaggtccaagattttgtacag
gataaactagatactatgctccgtacaacatttcggaagaagaaggacctatctaggatc
ctctctgatatgcgaaccctctccgcagattggatggccaacactagcaagggagatcca
gaacacaactcgttagaaacagaggaaatgagacaaagcacattctacccaaggccagtt
gcaccaacagctgcacagattcattgtttgcaatttctcatctgtgagcttgtatctggt
ggtaatatgagaaaacctggaggactatttggcaatagtggctctggaatacctgtggaa
gatcttaaacagctagagacatttttctataagctcagttttttcttgcatattttggac
tatacagctacaattggtactttaactgatcttggatttctttggttccgagagttttac
ctggaatcatctcgtgttatccagtttccaattgaatgttcactcccctggatgctggtt
gagcacgtcactgaaacacaggatgctggtcttcttgaaagtgttttgataccatttgac
ctttacaatgactctgcccagcatgcgttaacttgtctcaagcagagatttctttatgat
gaaattgaagctgaggtcgatctttccttcgatcttcttgttgaaaagcttaatgagatc
atctttacatattacaagagttgtgcagcaagtactcttcttgatagttcatttacctac
ttatgtgatgatggtgagaagtacttcgtcaaacccctgcggtttgacgccatattcaag
ctaagaagagtaatggtcctagggaggacaattgacctaagaagcctgattactcagaga
atgaacaaactgtttcgggaaaacattgatttcctactggagcgctttgaaagtggggat
ctatgtggtgtagtggaactgcaacaactgttggatattttggagcttacgcatcagtca
atatcaaaatttcttgagttggattcttactctcttatgcttagcgagatgcaagagaac
ctttcgctggtttcttattctagtcgcatctcttctcagatatggaatgagatgcagaca
gatttcttgcccaattttatcctatgtaataccacacagcgatttgttcgatcattaaaa
ggaacccatcactcttctcagagatcaagcgcctctaccgggaaggcctatttctattgt
ggatcacatgatttgaccatggcataccagggcatttctggtttgtaccgtgactttttt
gggatccctcatatgtttgcagttgttaagcttcttggttccagatcattacctggtatt
atccgtgctttattggatcatatatcaagtaagataacagctatggtgccaaaaataact
gcattgcaagaagcactgcccaaatctattggacttctttcatttgatggtggtatagca
ggttgtcagaagatagttcatgaaatattgacttgggaagcaaaatcagaagtgaaaact
gaagttcttcatgatctcaaggaaattgggagtgctttgtattggatgagccttctggat
attgttttgagacaaatagacactacacagttcatgcagtctgctccatggttgggattg
attccaggaaatgatgggcaagtgaagcatgcatactctgataatactccatttaccact
ttgttaagtgctgccaccaatgcagttgcatcaagtcctgcatgcccaaatccatcttca
tttcttgtcatggcaaagcaagctgaagctgccagtctactctacaaatcaaacctaaac
tctgggagtgtgcttgagtatgctcttgctttcacgagtgctgcgctggataggcattac
agtaaatggagtgcaactccaaagacaggatttattgacatcaccacatcaaaggacttt
tatcgtgtttttagtggtcttcagtatagctacttggaagagagcatcaatccttcgagg
aaacaagaaatgttgggtgactctgtagcttgggctggctgtacaatcatgtatttactg
ggacagcagcagcattttgagcttttcgacttctcttaccaatttctcaacgtggcagaa
gtagaaaatgcaacagtttcactttatcaatattcagataggaacaaaagcccgaatttc
ttgcagggttacgagggtatccttgaagcgatgaggaaagccaggaggctcaataaccat
gttttctccatgttgagagcacggtgccccctcgaggacaagattgcatgtgctatcaag
ccaagtggggcgcctcttcaccgtatgaagtttacgaacaccgtttctgcgttcgagaca
ttgccacagagagctacttga

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