KEGG   Oryza sativa japonica (Japanese rice): 4331646
Entry
4331646           CDS       T01015                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04144  Endocytosis
osa04145  Phagosome
osa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4331646
   04145 Phagosome
    4331646
   04148 Efferocytosis
    4331646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4331646
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4331646
   04031 GTP-binding proteins [BR:osa04031]
    4331646
Membrane trafficking [BR:osa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    4331646
 Endosome - Lysosome transport
    4331646
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4331646
  Exosomal proteins of other body fluids (saliva and urine)
   4331646
  Exosomal proteins of colorectal cancer cells
   4331646
  Exosomal proteins of bladder cancer cells
   4331646
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    4331646
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase Lipase_GDSL_lke AAA_7 MMR_HSR1_Xtn TniB Dor1 ABC_tran AAA_16
Other DBs
NCBI-GeneID: 4331646
NCBI-ProteinID: XP_015628467
UniProt: B9FB34 Q10RN9
LinkDB
Position
3:complement(join(2866374..2866412,2867107..2867193,2867278..2867367,2867736..2867841,2868038..2868132,2868251..2868334,2868431..2868504,2868964..2868988))
AA seq 199 aa
MGCSSSVPARSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESF
SKAQYWVKELQKHGSPDIIMVLVGNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTAD
NINQVFEEIAKRLPRPTAS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaatattagcaac
gataactccgctactgattcaaaggacttgcgtgctaagttggtattgcttggtgactct
ggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttgatcccacttcc
aaggtaactgtcggtgcatcatttttatcacaaacattggctttggaggactcaacaata
gtgaaatttgaaatatgggataccgctggacaagagaggtatgctgccttggcacctctt
tactacagaggagctgctgctgcagttgttgtctacgacataactagtccagaatcattt
agcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctgatattatcatg
gttttggttggtaataaagctgatctacatgaaaatcgacatgtatcttctcaggaagca
caagagtatgcagagaagaataatatggttttcatcgagacatcagcaaagacagctgat
aatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaacggcgtcttga

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