Oryza sativa japonica (Japanese rice) (RefSeq): 4331648
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Entry
4331648 CDS
T01015
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
4331648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4331648
03036 Chromosome and associated proteins [BR:
osa03036
]
4331648
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
4331648
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4331648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
4331648
NCBI-ProteinID:
XP_015628001
UniProt:
Q84VA0
Q0DV34
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All DBs
Position
3:2870326..2876851
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AA seq
379 aa
AA seq
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MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSE
QHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDK
GGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPPDPDNPNAQQYDEKNI
RRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTELVGLKSRIEKKNTYLQE
LQDQFVGMQKLIQRNEQLYGSGNIPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFN
STPFELHDDSFVLKAMSSCGEEQIDGIHDLISNGGESSSMPNIYRQQVQQPARSTNGTAR
LPSSPPIPGILKGRVKHEH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgtcgcccaccgcccggacgacgacggcgggcgcgccgcctcgacgttc
cagcgcccgccgcagccggccggcgcgcggccgtccctggccacgccgccgccctcgggc
ggagcgcaatccgcttcgacgagcggcgggagcgcgggctccccgtccagccgcagcgag
cagcatgtccccgcagccgcaggcatggcggcgggggcggcggcggcctctactccgatt
agtgagaataccttcctccgcctcaacgaccttgacatccacggcgacgatgcgccttcc
tcacaggctccaacgagcaagaagaagaagagaggagcacgagcagttggtcctgacaaa
ggtggcagggggctgcgccagtttagtatgaaagtttgtgagaaagttgaaagtaaaggg
agaacaacatacaacgaggtggcagatgaacttgttgccgaatttgcagatcccaataac
agcattttgccaccagatccggataatcccaatgcacaacaatatgacgagaaaaatata
cggagaagggtttatgatgctctgaatgttctgatggctatggagattatatctaaagat
aaaaaggaaattcagtggaaggggttgcctcgaaccagtataaatgatattgaagatttg
cagacggaacttgtaggactgaaaagtaggattgagaagaaaaatacatatttgcaggag
ctgcaagaccaatttgtaggtatgcaaaagttgatacaaagaaatgaacagctatatggt
tcaggaaacattccctcgggtggagttgcattaccatttatccttgttcagacacggcct
catgcaactgtggaagttgaaatatcagaagatatgcaacttgtacattttgactttaat
agcacaccatttgagttgcatgatgactcatttgtactgaaagcaatgagttcttgtgga
gaagaacaaatcgacggtattcatgatctaatttcaaatggaggtgagagctcaagcatg
ccaaatatttataggcagcaagtgcagcaacctgcaagatcaactaatggtacagctaga
ttgccaagctcaccccctattccaggaatactgaaagggcgagtgaagcacgagcattag
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