Oryza sativa japonica (Japanese rice): 4331812
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Entry
4331812 CDS
T01015
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4331812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4331812
03016 Transfer RNA biogenesis [BR:
osa03016
]
4331812
03012 Translation factors [BR:
osa03012
]
4331812
04131 Membrane trafficking [BR:
osa04131
]
4331812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4331812
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
4331812
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
4331812
Translation factors [BR:
osa03012
]
Eukaryotic type
Elongation factors
4331812
Membrane trafficking [BR:
osa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
4331812
Exosome [BR:
osa04147
]
Exosomal proteins
Proteins found in most exosomes
4331812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Semialdhyde_dhC
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
4331812
NCBI-ProteinID:
XP_015629803
UniProt:
O64937
Q0DUM6
A0A1L2JKK1
LinkDB
All DBs
Position
3:join(4122407..4122868,4123478..4124359)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagacgcacatcaacatcgtggtcattggccacgtcgactccggcaag
tcgaccaccacgggccatctgatttacaagcttggaggtatcgacaagcgtgtgatcgag
aggttcgagaaggaagccgctgagatgaacaagaggtccttcaagtacgcgtgggtgctt
gacaagctcaaggccgagcgtgagagaggtatcaccatcgatattgccctgtggaagttc
gagaccaccaagtactactgcacggtcatcgatgcccctggtcaccgtgacttcatcaag
aacatgatcacgggtacctcccaggctgactgtgccgtgctcatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcacgctcttcttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgttatgatgaaatcgtgaaggaagtctcatcctacctgaagaag
gtcggctacaatcctgacaagattcccttcgttcccatctctgggtttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggccccaccttgcttgaggctctt
gaccagatcaacgagcccaagaggccatcagacaagcccctgcgtcttccccttcaggac
gtgtacaagatcggtggtattggcaccgtgcctgtgggtcgtgttgagactggagtcctc
aagcctggtatggtggtgacctttggtcccagtggcctgaccactgaggtcaagtcggtt
gagatgcaccacgaggctctccaggaggctcttcctggtgacaacgtcgggttcaacgtg
aagaacgttgcggtgaaggatctgaagcgtgggtacgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtgatcatcatgaaccaccctgggcag
atcggtaacggctatgctccagtgctggactgccacacctcccacattgctgtcaagttt
gctgagctggtgaccaagattgacagacgatctggcaaggagctggagaaggagcccaag
ttcttgaagaacggtgatgctggtatggtcaagatgattcctaccaagcccatggttgtg
gagaccttctctgagtaccctcctcttggtcgttttgcggtgcgtgacatgaggcaaacg
gtggctgttggcgtcatcaagaacgtggagaagaaggacccaaccggtgccaaggtgacc
aaggctgccgccaagaagaagtga
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