Oryza sativa japonica (Japanese rice): 4331873
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Entry
4331873 CDS
T01015
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1 isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4331873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4331873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4331873
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
4331873
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4331873
Exosomal proteins of colorectal cancer cells
4331873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
APG6_N
Hamartin
TMF_TATA_bd
CDT1
TBPIP
Motif
Other DBs
NCBI-GeneID:
4331873
NCBI-ProteinID:
XP_015628650
UniProt:
A0A8J8Y469
Q10QR5
LinkDB
All DBs
Position
3:join(4544796..4544821,4545269..4545490,4545962..4546049,4546365..4546404,4546540..4546586,4546745..4546865,4547212..4547372)
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AA seq
234 aa
AA seq
DB search
MSWRFPLFGSNSQQQQPDPNFQDNPTQPWYPQSVVGSSSHPSTPSSSNVGPHQRASDNSQ
SSSRAQPSPAEAAGIIARLKDKSVDELQRLLKDKEAYNAFFNSLDQVKTQNNLRDELRKE
TVQLARENLEKEQRILELRNQCTIIRTTELAAAQDRLAELERQKDEIMRSYSPAALLDKL
QKSMAKLDEESEELHQKFLEKDIDLPTFVQKYKKLRAAYHKQALLHLAGKTSLR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagatttcctctttttggcagcaactcgcagcagcagcaacctgatccaaat
ttccaggacaaccctacgcaaccttggtaccctcagtctgtagttggttcatcttcacat
ccatccacaccaagctcttccaatgttggtccacatcaaagagcttctgataattcccag
tcttcatcgcgtgctcaaccatctccagctgaggctgcagggataattgctcggttaaag
gacaaaagtgttgatgagttgcagaggctgttgaaagacaaagaggcatataatgctttc
ttcaattcactcgatcaagttaaaacccagaacaacttacgcgatgagcttagaaaggag
acagtgcaacttgcaagagaaaatttggaaaaagagcaacggatcttggagctcaggaat
cagtgcaccattataagaactacagaactagctgctgctcaagataggttggctgagttg
gaaaggcaaaaggatgagattatgaggtcatattctcctgctgcactgctcgacaagctc
caaaaatcgatggcaaagttggacgaggagtcggaggagctgcaccagaagttcctggag
aaggacattgacctcccaacctttgttcagaagtacaaaaagctccgcgccgcctaccac
aagcaggcgttgctccatctcgccggcaagacctcacttcgctga
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