Oryza sativa japonica (Japanese rice): 4331886
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Entry
4331886 CDS
T01015
Symbol
OJ1217B09.7
Name
(RefSeq) E3 ubiquitin-protein ligase Os03g0188200 precursor
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4331886 (OJ1217B09.7)
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4331886 (OJ1217B09.7)
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
4331886 (OJ1217B09.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
INV_N
zf-RING_16
zf-C3HC4_3
Prok-RING_1
DUF4064
Motif
Other DBs
NCBI-GeneID:
4331886
NCBI-ProteinID:
NP_001404223
LinkDB
All DBs
Position
3:complement(4628268..4629329)
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AA seq
353 aa
AA seq
DB search
MAHRRIALAVLVTLLLSAFRPCLAQQSNDDTSKHHRSATAGGFTPTTVVVLVALITAFVL
LTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDV
KARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTA
PPVSLAAAESSDLTAPEEAVQEEESEELDEASLMATFTPESVIDFGATHDHEFDRAGYPH
YRRTQSAMDAAPDRHTLRLPEHVMKELAADRRHRRAASLAGYPDSVERTPRWLTSLWRSV
SWQRQSRADWDAGEEHGGSKRVHPVAGAQDETPSGSGSDGSKENSDSDALNRV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccgccggatcgcgctcgccgtcctcgtgacgctgctcttgtcggcgttccgc
ccttgcctggcgcaacagagcaacgacgacacgagcaaacaccaccggagcgccacggcc
ggcgggttcacgccgaccaccgtcgtcgtgctcgtggctctcatcaccgccttcgtcctc
ctcaccgtgttctccgtcctcatcaaccgctgcgcccaggcgcgcgctcccccgcgccgg
gcgttccgcagcacggcgtcccatcagcccgtcggcggcgccgccgccgcgtcccgcgcc
tcgcgtggcctcgacaaggaggtcgtggaggcgttccccacggcggtctacggcgacgtg
aaggcgcgcatggcggcgaagtcggggccgctcgagtgcgccgtgtgcctcgccgagttc
gcggacagcgacgagctacgggtgctcccggcgtgctgtcacgtgttccacccggactgc
atcgacccctggctcgccgccgccgtcacgtgcccgctctgccgcgccaacctcacggcg
ccaccggtgtcgctcgccgccgccgagagctccgacctgacggcgccggaggaggcggtg
caggaggaagagtcggaggagctcgacgaggcgtccctgatggccaccttcacgccggaa
tccgtcatcgacttcggcgcgacgcacgaccatgaattcgacagagcagggtaccctcac
taccggaggacgcagtcggccatggacgccgcgccggaccggcacacgctgaggctaccg
gagcacgtcatgaaggagctcgccgccgaccgcaggcaccggcgcgccgcgagcctcgcc
gggtacccggacagcgtggagaggacgccgaggtggctgacgtcgctctggcgatcggtg
tcgtggcagaggcagagccgggcggactgggacgccggagaggagcacggcggcagcaaa
agggttcacccggtcgccggagctcaggacgagacacccagcgggtccggctccgatggg
agcaaggagaactccgattctgacgcgttaaaccgagtttga
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