Oryza sativa japonica (Japanese rice): 4331949
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Entry
4331949 CDS
T01015
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4331949
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
4331949
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Pep1_7
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
4331949
NCBI-ProteinID:
XP_015632656
UniProt:
Q10QG1
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Position
3:join(5181702..5181828,5181942..5182338,5182425..5182651,5183300..5184207)
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AA seq
552 aa
AA seq
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MEVETSSGTAERGAGAGAQQQPPPQPQPQPPAKKKRALPGMPDPDAEVIALSPKTLLATN
RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALG
DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRRDSFI
THRAFCDALAEESAKARAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPPPAAA
PAPAAQPEQRDRDAALDQFATPAPAPAPPPVTAPPPPPVAAPNDCVSSSSSGVAPTSQSL
LSSMFAPPSVAQAPQYADPIGVGAGGHQERAVPAKPPALCLAPNASSSLFTAPVPADRQQ
FAPPPPPSPSPHMSATALLQKAAQMGATSSSSSFLRCLGLDMSSSSSAPPSSSGQQQQHH
HHHHQETMQVPLPASSLPEWPPRLQPEPSPMLSSGLGLGLPYDATGGPVSLPELMMGQST
LFSAKPATLDFLGLGVSPTGASTSRGFPTFIQPIGGAVSLAGSATVAAETFGAAHGGQAN
PWERNPSSSPIL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgagacgtcgtccgggacggccgagcgcggggcgggcgcgggcgcgcagcag
cagcctccgccgcagccgcagccgcagccgccggccaagaagaagcgtgcactccccggc
atgccagatcctgatgcggaggtgatcgcgctgtcgcccaagacgctgctggcgacgaac
aggttcgtttgcgagatctgcaacaaggggttccagcgcgaccagaacctgcagctgcac
cggcgcgggcacaacctgccgtggaagctgcggcagcggagcgggaaggaggtgcggaag
cgggtgtacgtgtgcccggagccgacgtgcgtgcaccacgacccgtcgcgggcgctcggc
gacctcaccggcatcaagaagcacttctgccgcaagcacggcgagaagaagtggaagtgc
gacaagtgctccaagaagtacgccgtccagtccgactggaaggcgcacaccaagacctgc
ggctcccgcgagtaccgctgcgactgcggcaccttattctcacggagggacagcttcatc
acccaccgcgccttctgcgacgccctggccgaggagagcgccaaggcgcgcgcggcgccg
ccgccgccggccgacgaggacgggacctcggcttctgccggtgcgccgccgccgcaagcg
cctctaccaccacccgcgccggtgccggcgccagcaccgccacctcctccggccgcagct
ccggctcccgcggcgcaaccggagcaacgagatcgggatgctgcactggatcagttcgcc
acgccggcgccggcgccggcgccgccgccagttactgctcctccgccgccgccggttgcc
gctcctaatgattgtgtcagcagcagcagtagcggcgtggcgccgacgtcgcaaagcctc
cttagcagcatgtttgcaccgccgtcggtggcccaggcgccgcagtacgcggaccccatc
ggagttggagcgggtggccatcaggagcgcgcggtgcctgccaagcctccggcgctgtgc
ctcgcgcccaacgcgtcgtcgtcgctgtttacggcgcctgtaccagctgaccggcagcag
ttcgctccgccgccaccgccgtccccgtcgccgcacatgtccgccacggcgttgcttcag
aaggccgcgcagatgggcgccacctcgtctagctcgtcctttctccgctgcctgggcctc
gacatgtcatcgtcatcgtcggcgccgccttcgtcgtcagggcagcagcaacagcaccac
caccatcaccaccaagaaaccatgcaagtgccactcccggcgagttcgctgcccgaatgg
ccgccgcggttacagccggagccatccccaatgctgtcctccgggctcggcctcgggtta
ccatacgacgcgacaggcggtccggtgagcttgccggagctcatgatgggtcagtccaca
ctgttcagtgccaagccggcaacactagatttcttggggcttggagtgagcccgacaggc
gcgtcgacaagcaggggcttcccgacattcatccaacccatcggcggcgctgtcagcttg
gccgggagtgccaccgtcgccgcggagaccttcggcgccgcccatggcggccaggcaaat
ccgtgggagaggaacccgagtagctcaccaatcctgtaa
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