Oryza sativa japonica (Japanese rice): 4332006
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Entry
4332006 CDS
T01015
Name
(RefSeq) protein RBL
KO
K14961
COMPASS component SWD1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4332006
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
4332006
COMPASS/SET1 complex (yeast)
4332006
MLL-HCF complex
4332006
MLL3/MLL4 complex
4332006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Cytochrom_D1
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
VID27
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
HMG14_17
Motif
Other DBs
NCBI-GeneID:
4332006
NCBI-ProteinID:
XP_015633270
UniProt:
A3AFB4
Q8H060
LinkDB
All DBs
Position
3:complement(join(5693761..5693987,5694479..5694752,5694840..5695933,5696428..5696526,5697125..5697143))
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AA seq
570 aa
AA seq
DB search
MNVPIVDPLQGDFPETIEEFLQYGSMKCIAFNRRGTLLAAGCANGTCVIWDFETRGIARE
LHDKDCTAPITSVAWSKYGHHLLASATDKSLTLWHVVNEKKIARITLQQTPLSVRLHPGG
PSTPSICLACPLSSAPILVDLNTGSTTVLPAFLSDNGNLPAPNTRNKFSDGSPPFTPTAA
TFDKYGDLIYVGNSKGEILIIDSKSIKVHAVIPIPGGTVVKDIVFSRDGRYLLTNSNDRV
IRVYDNLLPVKGSGEEIEKISSNNISYESHYEKLKANGASCLAISCELLDAIAKIPWKAP
CFSGDSEWIVGASASKGEHRLCIWNRSGRLVKILEGPKEALIDIAWHPVDPTIVSVSVAG
LAYIWAKEHVENWSAFAPDFVELEENEEYVEREDEFDLNAYVEKAEEQLVNEDEYVDIET
YDKNSTFSDLDDSSSTTMELIYLAAIPIPDTPDEQPDKCLGSSSKLEDSNHSDSPSSLDA
VQNGQAIPPASSPMEVDNSTAEEPAEAVNSKRRRRLSAKGLELQQAEKGKKPTTKNKSNG
KSPGSNGKQLEPANGNSSAVDDEATEDDEI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccctatagtcgatcctttgcagggggatttccctgagacgattgaggagttc
ttgcagtatgggagtatgaaatgcatagcattcaaccgcagaggaactctccttgctgct
ggatgtgcaaatggtacctgtgttatctgggactttgaaacaagggggattgcaagagaa
ctgcatgataaagattgtactgcacctataacaagtgtggcctggtctaaatatggtcac
catttgctcgcctctgctactgacaagtcattgacactttggcatgtggtaaatgagaaa
aaaattgcccgcattactcttcagcagactccgttaagtgtccgtcttcatcctggtggt
ccatctaccccatctatttgtttggcatgccctctctcgtctgcacctattcttgttgat
ttaaacactggaagtactacagttctcccagcttttctgtctgataatggtaacctccct
gctcctaatactcgcaataaattttctgatggttctccaccttttacaccaactgctgca
acatttgacaagtatggggatctgatatatgtgggcaattccaagggagagatattaatt
atagattcaaaaagcatcaaggtacatgctgtgattcccatcccaggtggaacagtagtt
aaggatattgttttcagcagggatggccgatatctactcacaaactctaatgatcgggtg
attagagtctatgataatcttctgcctgttaaaggttctggagaggagatagaaaaaata
agcagtaacaacattagctatgagagtcactacgagaagctaaaagcaaatggtgcaagc
tgcctagctatttcttgtgaacttttggatgctatcgcaaagataccgtggaaggcacca
tgctttagtggtgatagtgagtggattgttggtgcttcagcaagcaaaggagagcacaga
ttgtgcatatggaaccgatcaggacgtcttgtaaaaatccttgaaggtccaaaggaagct
cttattgatattgcctggcatccagtagatcctacaattgtttcagtgtctgtagcaggc
ttagcatacatttgggccaaggaacatgtagagaattggagtgcatttgctcctgatttt
gtagaattagaagaaaacgaagagtatgttgaacgagaggatgagtttgacttaaatgca
tatgtagaaaaggctgaagaacaactggtaaacgaggatgagtatgtcgatattgagaca
tatgataaaaactcaacgttcagtgatttggatgatagcagtagcacaacgatggagctc
atctacttggcagctattcctatcccagacactcccgatgagcagcccgacaaatgcctt
ggaagttcatcgaagttggaggacagcaatcattctgattccccatcctcattggatgct
gtacagaatggacaagcgattcctccagcatctagtccaatggaagtggataattctact
gctgaagaaccagctgaagccgtgaactcaaagaggaggcggaggctgtcggctaagggc
ctcgagctgcagcaagccgagaagggcaaaaaaccaacaacaaagaataagtccaacggc
aagtccccagggtccaatggcaagcaattggagcctgctaacgggaacagctctgctgtt
gatgatgaagccaccgaagacgatgagatctga
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integrated database retrieval system
