Oryza sativa japonica (Japanese rice): 4332050
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Entry
4332050 CDS
T01015
Name
(RefSeq) protein RIK
KO
K25780
kelch domain-containing protein 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4332050
Spliceosome [BR:
osa03041
]
Complex B
Other components
Prp19-related factors
4332050
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
4332050
NCBI-ProteinID:
XP_015630294
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All DBs
Position
3:join(6014825..6014886,6015028..6015256,6015359..6015457,6015571..6015605,6015683..6015758,6016541..6016651,6016990..6017076,6017291..6017384,6017478..6017595,6018036..6018531,6020036..6020567,6020657..6020781)
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AA seq
687 aa
AA seq
DB search
MTEDRAPKVPDEPAAAAAKQRKKRKWDQPAEDVVAAAAAAAAVAGLPVVNIGALSGVSIP
GAAGPLGNIVAVPYTLPVHLAPSVLQTAAAAVQKLSQAKMPDELIAREIVINDADPSVRY
KLTKRQTQEEIQRCTSTVIITRGRYHPPNGQTDGEKPLYLHISAGSQLKDTAERIKAVDR
AASMIEEILKQGPNPEGTIQSNGQAVHPFSASIFLGFHADPSLNVAAWVRGPNDQYINHI
MNETGVTVVLRGKGSGTPVNCHAEASQQPLHLYISSMHVKNLEAAKVLAENLLDTIAAEF
GASRISSSKVYGAVPPPQQLLDGVQTSGTIPDVHPTLGPNVLTGASHSFASTGANASLVA
PSVTSQSGAPSYSVVSPPSNLICPSQPANGGTFYGGYGGIYPQATPLQQVALTLKHASSS
STQVVSATSTSTSTVAMVNPCSHAEADKRSQRRKFQELPVSQGATTEVQNSQQRSKFVKT
GLDGLGNMTNSSIEPPIKVQPGSNGMLLQDQPHVSAHPSASKNMLPPPPPPPRNMLPPPP
KSMPPPPPKFPSNEMSRNEDRCADLNKPMAPPKSMPPPPPKSMPPPPPKFPSNEMSRNED
RRSDLNKPMAPPRSLDVSSVSPPNLYSAQLPSKEPRVVKPGGASVSDTLLKLMDYGDDDE
EDNIDETNSVLGGNPTSISGQKPFWAV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaccgcgcccccaaggtccccgacgagcccgccgccgccgcggccaagcag
aggaagaaaaggaagtgggatcagcccgcggaggatgtcgtcgccgcggcggcggctgct
gctgctgtggcggggttgcccgtggtgaacatcggtgccctctccggcgtgtcgatcccg
ggagccgccggtccgttggggaatatagtcgctgtgccctatactttgccggtgcatctg
gcgccttcggtgctccagaccgccgcggcagcggtccagaaattgagtcaggcaaaaatg
cctgatgagctaatagcaagagaaattgttataaatgacgccgatccgtctgtgcgatat
aagcttacgaaacggcaaactcaggaggagattcagagatgtacaagcactgtcatcatt
actaggggaagataccatccaccaaatggacaaactgatggtgagaagccactctacttg
catatatctgctgggtctcagctaaaagatactgctgagcgtatcaaagcagttgatcgt
gcggcttcaatgattgaggaaattttaaaacaaggcccaaacccagaaggcactatccag
agcaacggacaggccgttcatccttttagtgcctcaatatttttgggttttcatgcagat
ccatcacttaacgttgcagcttgggttcgtggtccaaatgatcagtacataaatcacatc
atgaatgaaacaggggtcactgttgtactcagaggaaaaggttcagggactccggtcaat
tgtcatgctgaagcatcacaacaacctctacacctctacatctcaagtatgcatgtgaag
aacctagaagctgcaaaagttttagcagaaaaccttctagatactatagcagctgaattt
ggtgcttccagaatttcttcttcaaaagtatatggtgctgttccacctccgcagcaatta
ttggatggtgtacaaacgtcaggaacaataccagatgtacaccctactttaggccctaat
gtgttaaccggagcatcacattcctttgcatctactggagctaatgcttccttagttgct
ccttcagtgacatctcaatctggggccccgtcttattctgtggtttcaccacctagtaac
ctgatatgtcctagtcaaccagcaaatggtgggacattttatggtggctatgggggcatt
tatccccaggcaactccattgcagcaggttgcattaacactcaagcatgcttcatcatca
tcaacccaggttgtttcagcgacgtctacatcaacaagcactgtggcaatggtgaaccct
tgttcacacgcagaagcagataaacgctcacaaaggaggaaattccaggaattaccagtt
tcacagggcgcaaccacagaagttcagaactcacaacagaggtccaaatttgttaagaca
ggtttagacggtttaggtaacatgaccaattcatcgattgaacctccaattaaagttcag
cctggatcaaatgggatgcttcttcaagatcaaccgcatgtttctgcacatccatctgca
tccaagaacatgctgccgccaccaccaccaccacccaggaacatgctacccccacctccc
aagagcatgcctccgccaccacctaagtttccttcaaatgagatgtcaagaaatgaggat
aggtgtgcagatttaaacaagccaatggcacctccgaagagcatgccacccccacctccc
aagagcatgcctccgccaccgcctaagtttccttcaaatgagatgtcaagaaatgaggat
aggcgttcagatttaaacaagccaatggcacctccgagatccttggacgtgagttcagtc
tcaccaccaaatttgtattcagcacaattaccttcaaaggagcctagagtggtcaaacct
ggtggggcatctgtttctgatactctgctgaagcttatggattatggagatgacgatgaa
gaggacaacatcgatgagacgaatagcgtgcttggagggaacccaacttccatttctggg
cagaaaccgttttgggctgtgtga
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