Oryza sativa japonica (Japanese rice): 4332118
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Entry
4332118 CDS
T01015
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4332118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4332118
03036 Chromosome and associated proteins [BR:
osa03036
]
4332118
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4332118
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4332118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
4332118
NCBI-ProteinID:
XP_015632056
UniProt:
Q10PQ6
A0A8J8XCR4
LinkDB
All DBs
Position
3:join(6621407..6621582,6621787..6621911,6622012..6623787,6624372..6625087,6626121..6626279,6626449..6626758,6627366..6627433,6627926..6628468)
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AA seq
1290 aa
AA seq
DB search
MFSPAIKKPHLLHRRDKEEASPSPPPAPAHTPAPRGFAVHDRPATGTPAPWTSSSLLARI
STSTRTDRTGDSGQIQPVHVSEFPQIVRNAQANLLQKSFSGKNMLAGGIDKETSLAWMLC
GNELFIWSYLASVAKDCLVLEVPSSLMGNKEEKSLCGNQWAVCIVRWGSSGASTRSSGDI
LHRRSSTGFILCNKRTQAIAYWSDIYAESSKSSVLDLIGYGDTSSGDGTSGNCRINSLIA
VAVPGGINECIVIASQPTGTLWMFWCSPAAVRRREIHKGTLGVYNADHSQKNSGGRSLAW
LPSKASSKAAERTFFLLTSHELQCWSISFGHDINCKKIGSQEIVGSDGDMGIKKDIAGQK
NIWLLDMQIDDHGKEIIILVATFCKDRVSGSNYTQYSLLTMLYRPNQKFSSEDNVIKTER
FLEKKAPSQVIIPKARVEDEEFLFSMRLKTGGKPSGSVIILSGDGTATIAIYWRGSTRLY
QFDLPWDAGKVLDASVIPSSEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRK
GSCNEAVAEEKRRNQAFNASVVPRRASSEAWSAGERQRPALTGIAQQAVVDEESEMLLNR
LFHDFVLSGTVHEALQKLRAAGAFDKEGEMNIFVRISKSIVNTLSKHWTTTREAEFLAST
IVSSLTEKQQKHKKFLQFLVLSKCHEELSSKQRTAMLTVMEHGEKLSGMIQLRELQNALS
HQRSSIHLSPQSKNQTTGALWNLIQLVGEQSRRNTVLLMDRDNAEVFYSRVSDIEDLFNC
ISHQLQYIITGEENPSVQMQRALELSNACMTLVQAALRYREEHKDWYPSPEGLITWNSQP
VVRSGIWRVASFAMELLREPGAADMSMKSNLWSQLERLTDILLDAYIGLLTAKFERGDEH
GVLIQEYCDRRDELLGSLYDLAKQIVDAKYQETTEVTDNLELKESIFREVTSPILATAKR
HEGYQTLWQICYDLSDTGLLRSLMHDSVGPHGGFSFFVFKQLVNRRQHAKLLRLGEEFPE
ELANFLKERDDLLWLHEICLNRFSSASKTLHTLVSPEEDANLTSNRKSLSFVERRRFLYL
SKIAAAAGKDVDYEVKVAHIDADIRILNLQEEIVQHDPEYAPDKYTTKPFRPLELIEMCL
KGDRELSLKAFEVFAWTRASFRSSNKGLLEACWMNAADQDDWVSLQEESSGGWSDEVIQE
SLQGTVLFNASRLCYSPDAVVYDGSFEDVLPVKKEDVHLRGLEGRCLSVEEVLMQHKDFP
DAGKLMMTAVIMGKELPYTVSTAEPVDMDS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccggcgatcaagaagccccacctgctccaccgcagggacaaggaggaggcg
tccccctcaccccctcccgctcccgcgcacacgcccgcgcctcgtggatttgccgtccac
gaccgccccgccaccggcaccccggcgccgtggacctcctcctccctgctcgccaggatt
tcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggtgcatgta
tccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagagtttttcc
ggcaagaacatgcttgctggtggcattgataaagaaacatcccttgcatggatgttatgt
ggaaatgagctttttatctggagttacctggcttctgttgcaaaagactgtcttgtactt
gaggtcccttcttctcttatggggaacaaagaagaaaaatctctatgtggtaatcagtgg
gcagtttgcatagtgagatggggtagtagtggtgcatcaacacggagcagtggagatata
ttgcatcgaagaagttcgactggttttatcctgtgcaacaaaagaacacaagctatagct
tattggtctgatatctatgctgaaagcagtaagagttcagttcttgatttaattggatat
ggtgatacatcttcaggtgatggcacatctggaaactgcaggattaattctcttattgca
gtggcagttccaggaggtattaatgaatgcattgtgattgcttctcagccaacaggcaca
ttatggatgttctggtgttcaccagctgcagttcgtcgaagagaaattcataagggtaca
ttaggagtttataatgctgatcattctcagaaaaatagtggtggaaggtccttggcttgg
ctaccaagtaaagcatcatctaaggctgctgaacggacgttctttttattgactagtcat
gagctgcaatgctggagcatctcattcgggcatgatatcaactgcaaaaaaatagggtct
caggaaattgttggtagtgatggtgatatgggaataaagaaagacatagctggacagaaa
aacatatggcttttggacatgcagatagatgatcatgggaaagaaattatcattcttgtt
gctaccttctgcaaagatcgggtgagtgggtcgaactacactcagtattctcttctgacg
atgctgtacagacctaaccaaaagttttcatctgaagataatgtgattaaaactgaaagg
tttttggagaaaaaagctccttctcaggtgataatccctaaggctagagtagaggatgaa
gagttcttgttttctatgaggctaaaaactggtggtaagccttctggttctgtaatcata
ctgtcaggtgatggaacagcaacaatagccatatactggagaggttcaacccgtctctat
caatttgatctgccttgggatgctggaaaggttctcgatgcttcagttatcccatcttcc
gaggacagagatgaaggagcttgggttgttcttacagaaaaggcaggagtgtgggcaatt
cctgagaaagctgtgttagttggtggggttgagccaccagagcggagcttgtcaagaaaa
ggaagttgcaatgaagcagttgctgaagagaaaagaagaaatcaggcattcaatgctagt
gttgtacccagaagagctagttctgaggcttggagtgctggagagaggcaaagaccagca
ttaactggtatagctcagcaggctgtggttgatgaggagtctgaaatgttattaaaccgg
ttatttcatgattttgttttgtccggtacagttcatgaagcacttcaaaagcttagagca
gcaggcgcatttgacaaagagggtgagatgaacatatttgttcgaataagcaaatccatc
gtaaacactctatctaagcattggacaacaactagagaagctgaatttcttgcttcaaca
attgtttcatccctaactgagaagcagcaaaaacacaagaaattccttcagtttcttgtc
ttgtctaagtgccatgaggaactctcttcaaagcaaagaactgcgatgctaactgtcatg
gagcatggagaaaagctctctggaatgatccagctcagagaattacaaaatgctcttagc
catcaacgctcaagcatacatttatcacctcagtcaaaaaaccaaacaactggtgcattg
tggaaccttattcaattggttggtgagcaatctcgaagaaacactgttctcttaatggac
cgtgataatgctgaagtgttctacagcagagtttcagatatagaagatctatttaattgc
atatctcatcagcttcaatacattataaccggagaagaaaacccttctgttcagatgcaa
cgtgcacttgagttatcaaatgcttgcatgaccctagttcaggcagcattgcgctacaga
gaggagcacaaggactggtatccttctcctgaaggactgataacatggaacagccagcct
gttgtacgatctggaatctggcgagtagcatcctttgccatggagcttttgagagaacca
ggggctgcggacatgtcaatgaagtcaaacctatggtctcagttggaacgactcacagat
atcctactggatgcatatattgggttgttaactgctaaattcgagcgtggggatgagcat
ggtgtgctaatccaagaatactgtgacagaagagatgaacttcttgggtccctctatgac
ctcgcaaaacaaattgtagatgcaaaatatcaggagacgacagaagtcactgacaatctg
gaactgaaagaatctatattcagagaagtcacttctccaattttggcaacagctaaacgg
catgaagggtaccaaacattgtggcagatttgctatgatctcagtgatacaggccttctt
cgcagtcttatgcatgatagtgtaggacctcacgggggattcagtttctttgttttcaaa
caactagtcaacaggcgtcaacatgctaagctattaagattaggtgaagaattcccggaa
gagctagccaattttctgaaagagcgggatgatcttctgtggcttcatgagatatgctta
aatcggttctcttctgcttcgaagactcttcatactctcgtgagtcctgaggaagatgct
aaccttacaagcaacaggaaatcactgtcctttgttgaaagaagacgctttctctatctc
tccaaaattgcagcagcagcaggtaaggatgttgattatgaagtgaaggttgcccatata
gatgcagatatccgaattctaaatctgcaggaagagattgttcagcatgacccagagtat
gcaccagataaatatactaccaagccatttcgtccattggaactgatcgagatgtgcctg
aagggagatcgagagctctctcttaaagcttttgaagtatttgcttggacgagggcctcg
ttccggagctccaacaaaggccttctagaggcttgctggatgaatgcagccgaccaggac
gactgggttagccttcaagaggaatcttcaggaggttggagcgatgaagtcatccaagaa
tctcttcagggcactgtcctgttcaatgcctccaggctgtgttatagcccagacgccgtg
gtgtatgacggttcgtttgaggacgtgctgcctgtgaagaaagaagacgtgcatctgaga
ggcttggagggcagatgtctctcagtggaggaagtgctgatgcagcacaaggatttccct
gatgcgggtaaattgatgatgaccgcggtgataatgggcaaggagctaccttatactgtt
tccacagctgaacctgttgacatggactcttga
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integrated database retrieval system
