Oryza sativa japonica (Japanese rice): 4332221
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Entry
4332221 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K13146
integrator complex subunit 9
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4332221
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
4332221
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
4332221
NCBI-ProteinID:
XP_015627886
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Position
3:complement(join(7622529..7623044,7623128..7623179,7623268..7623353,7623445..7623562,7623827..7623918,7624001..7624099,7624489..7624699,7624817..7625161,7625659..7625876,7626213..7626527,7626609..7626617))
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AA seq
686 aa
AA seq
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MKLTCLDTGVDGGYYTPASHLLEVEGLRILLDCPIDLSALTAFSAVPLGASSSSGDAEDL
IRGVPYYRSPTAVAAAKAGHIDAVLVSSATGLLGLPFLTRFPGFANTKVYVTEVAARMGS
LMMRELVEMHREFVRCYGPDRDQSPVWMEGEKLKKLMSVLQKITTEDEENNNLAALVSLY
SLDNIEECMQKTQYVKYGEEVCFNGMLMLKASSSGLELGNCVWTIKGPRASMTYLPSSIF
VSAHALDFDYSSLKGNDVILFSDFSSLNGMYDDNKKMGEHIVDETDILLASNSVFRDDGM
DEDETIKFLCSNDDIAEEIERISFICSCIIDAINSGGSVLIPIGRIGIILLLLEHMSETL
HSSNMKSQVPIFMISETAEEIITFTNALPEWLCKSRQEKLFSCEPLFGHVELLKEGKLSL
FSHLYSKGLLAAWKEPCIVFCPHWSLRHGPAVHLLHRWRADKRCLLVLEQGVDAELTLKP
FMPLAIQVLGCSFLSGIKVGKIDPLLGLLKPKLILFPEGQKSLCPATDKQPWSFLYYSKG
KTIEVPNMREEFEVRMTTEVAFGLQPRQLDKTTAVARLKAKLLLSNGQYVLAAAKSELDR
SERHLLHWGTVDASCIPSALQEKGIVCSFSADADYSAPSDRERVISITSPGEALVKVTSE
RTTIYCDDEETAERVYDALRSICNGI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacctgcctggacaccggagtcgatggaggctactacacgccggcgagtcat
ctcctggaggtggaggggctccgtattctccttgactgccccatcgacctctccgctctc
acggcgttctccgcggtgcccctcggcgcatcgtcctcctccggtgatgcggaggaccta
atccgcggtgtgccctactaccggtcgcctaccgcggttgcggccgccaaagcaggccac
atagacgccgtgcttgtgtcatccgctacggggctgcttggcctcccgttcctcacgcga
ttccccggatttgcgaacaccaaggtctatgtgacagaggtagctgctaggatgggaagt
ctaatgatgagagagttggtagagatgcaccgtgagtttgtaaggtgttatggaccagat
agggatcagtcaccagtgtggatggaaggggagaagctcaagaaactcatgtcagtgttg
cagaagatcacgactgaagacgaggaaaataataatttagctgctttggtgtcactttac
agtctggataatatagaagaatgcatgcaaaaaacccagtatgtaaaatatggagaggag
gtttgcttcaatggcatgttgatgctgaaagcctctagttctggtctcgaacttggcaat
tgtgtttggacaataaaaggtccaagagcaagtatgacctacttgccgagctccatattt
gtgtcagctcatgcattagactttgattatagctctctgaagggaaatgatgtgatattg
ttttcggatttttcttccttaaatggcatgtatgatgataacaagaagatgggtgagcat
atagtggatgaaactgacattctccttgctagtaattcagtgttcagggatgatggcatg
gatgaagatgaaaccatcaaattcctgtgcagcaatgatgatattgcagaggagatagag
agaatcagcttcatatgctcatgcatcattgatgcaataaattctggtggttctgtatta
ataccaataggacgaattggtattattcttttgcttttggaacatatgtcagaaacacta
cattcttccaacatgaagagtcaggttcccatatttatgatttctgagacagcagaagaa
ataattacttttaccaatgccttgcctgaatggctatgcaagtcacgccaagagaagctt
ttctcttgtgagccgttattcggccatgtagagcttttgaaggaaggcaaactatcactg
ttctctcatttatactcaaagggcctgctggcagcttggaaggaaccttgcattgtattt
tgtccacattggagtcttaggcatggcccagctgtccatttgcttcatcgatggcgtgca
gacaaacgatgtcttcttgttttggagcaaggagttgatgctgagttgactctaaaacct
ttcatgcctctggcgatccaggtccttgggtgttctttcctttctggaataaaggtgggg
aaaattgatccattactgggattgctgaaaccaaagctcatactgtttcctgaaggtcag
aagtcgttgtgtccagccacagataagcaaccatggtcattcctgtattactcaaagggg
aaaacaatcgaggtcccaaatatgcgggaagaattcgaggtgcgcatgacaactgaggtt
gcctttgggttgcaacctaggcagctggacaagaccacagctgttgcgaggttgaaagca
aagctccttctaagcaatggacaatatgtgctagctgctgcaaagagtgaattagatcga
tcagagcggcacttgctacactggggaactgtggacgcgagctgtataccgtcagccttg
caggaaaagggaattgtatgctcgttttctgcagacgctgattactctgcaccttcagat
cgtgaacgtgtaatttcgatcactagtccaggagaagccctggtgaaggtgacatctgaa
aggactactatttactgtgatgatgaagaaacagcagagcgtgtttatgatgctcttcgt
agtatttgtaatgggatatga
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