Oryza sativa japonica (Japanese rice): 4332310
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Entry
4332310 CDS
T01015
Symbol
HRD3, OsSel1
Name
(RefSeq) eRAD-associated E3 ubiquitin-protein ligase component HRD3 precursor
KO
K14026
SEL1 protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4332310 (HRD3)
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_3
Motif
Other DBs
NCBI-GeneID:
4332310
NCBI-ProteinID:
NP_001404385
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Position
3:join(8448922..8449536,8450649..8451140,8451933..8452148,8453245..8453568,8454322..8454564,8455387..8455581)
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AA seq
694 aa
AA seq
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MQNRRRSRPVVPTPMARVRHRHLLLLVAAVAAAASALLPCASAVRPFVLVLSRDDFLKDT
AGAHPSLPSADADSDEWDDFDDESPATDPLLSPSSWVPLLDPASASPSGDEPDSPSDALF
VAGVRAMLSAASAGDDAAFATAAAQIEAAATGGHPGAQSALAFLSGAGMTRPASRSRAFL
LHKFAADAGDLQSKMALAYSFFRQEMYEEAVTLYAELAEAALTSSLISKEPPVIEPVRLH
SGTEENKEALRKSRGEDDEDFQITEYQAQRGNTVAMHKLGLLYYYGLRGVRRDYGKAYHW
FSKAVEKGDTRAMELLGEIYARGAGVERNYTEAYKWLTLAAKQQQYSAYNGLGYLYVKGY
GVEKKNLTKAKEFFEIAAEHKEHGGYYNLGVLYLKGIGVKRDVMTACNFFLRAVNAGQPK
AIYQVAKLFQKGVGLKRNLQMAAVMYKSVAERGPWSSLSRWALESYLKGDIGKALLLYSR
MADLGYEVAQSNAAWILDRYGDESICMGESGFCTDMERHLRAHALWWQASEQGNEHAALL
IGDAYYYGRGVGRDYERAAEAYMHAQSQSNAQAMFNLGYMHEHGHGLPLDLHLAKRYYDQ
AVEVDPAAKLPVMLALTSLWIRKNYDGSFLVHFIDSLPEVYPVVEEWVEDVLMDEGNATI
FTLFACLVTVLYLRERQRRQAAAANPQQPDGAPI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaggcggcgatctcgtccggtggtacctactccgatggctcgcgtccgccac
cgccatctcctcttgctcgtcgccgccgtcgccgccgccgcctccgcgctcctcccgtgc
gcctccgcggtccgcccgttcgtgctcgtcctctcccgtgacgacttcctcaaggacacc
gccggcgcgcatccctccctcccatcagccgacgccgactccgacgagtgggacgacttc
gacgacgagtcccccgccaccgaccccctcctctccccgtcctcctgggtccccctcctc
gaccccgccagcgcctccccttcgggcgacgagccggactcgccgtccgatgcgctcttc
gtcgctggcgtgcgggcgatgctctccgcggcctcggcgggggatgacgcggcgttcgcc
accgcagcggcgcagatcgaggccgcagctacgggggggcaccccggcgcgcagtccgct
ctcgcgttcctctccggcgcagggatgacgcgcccggcgtcccgctcgcgcgccttcctg
cttcacaaattcgccgccgacgcaggagacctccagtctaagatggctctcgcctactcc
ttcttccgccaggagatgtatgaagaagcagtcacactttatgctgaacttgcagaggct
gcgcttacaagctccttgatctcgaaggagcctccagtgattgaaccagtcaggttacac
agtgggaccgaagaaaacaaggaagccttgaggaagtctcgaggcgaggatgatgaagat
tttcaaatcacagagtaccaggcacaacgaggcaatactgttgcaatgcacaaattaggg
cttctgtattactatggcctacgaggagttagacgtgattatgggaaagcatatcattgg
ttttcaaaggctgtggagaaaggcgatacacgggcaatggagcttctcggagagatctat
gctagaggtgctggagttgaaaggaactacactgaagcatacaagtggttgacacttgca
gcaaagcagcaacaatactcagcttacaatggactgggttatctctatgtcaaaggttat
ggggttgagaagaaaaacttgacaaaagcaaaggaattttttgaaattgcagctgagcat
aaggaacatgggggttattataaccttggcgtcttgtatctcaagggtattggagtaaag
agggatgtgatgacagcatgcaatttctttcttcgagcagttaatgctgggcaaccaaaa
gctatttatcaagtggcaaagttgttccagaaaggtgttggtcttaagaggaatctccaa
atggcggcagtgatgtacaaatctgttgctgagaggggcccctggagctcactttctaga
tgggctctggaatcttatttgaaaggtgacatagggaaagcattactcctgtattctaga
atggcggatcttggatatgaggttgcacaaagcaatgctgcctggattcttgataggtat
ggcgatgaaagtatttgcatgggagaatctggcttctgtacagatatggaaagacatctc
cgtgcacatgctctgtggtggcaagcatccgagcagggtaacgaacatgctgccttgtta
attggtgacgcctactactatggccggggtgttggcagggattacgagcgtgcagccgag
gcatatatgcatgcgcaatcacaatctaatgctcaggccatgtttaaccttggttatatg
catgagcatggccatggacttccccttgacttgcacctggcaaaaagatattatgatcag
gctgttgaggtggatccagcagctaagctccctgtcatgcttgcactaacaagtttatgg
ataaggaagaactatgatggaagctttttggttcattttattgattcactgccggaggta
tatcctgtagttgaggaatgggtggaggatgttcttatggatgaggggaacgcaacaata
tttactctcttcgcttgccttgtaactgtcctatatttgcgagagcgtcagaggcgtcaa
gctgcggccgccaaccctcaacagcctgatggtgcacccatctaa
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