Oryza sativa japonica (Japanese rice): 4332312
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Entry
4332312 CDS
T01015
Name
(RefSeq) ubiquitin-ribosomal protein eL40A fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4332312
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4332312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4332312
04121 Ubiquitin system [BR:
osa04121
]
4332312
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4332312
Archaea
4332312
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
4332312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
DUF2604
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
4332312
NCBI-ProteinID:
XP_015630915
UniProt:
A0A9K3Y723
A0A5S6R6S5
LinkDB
All DBs
Position
3:join(8460150..8460252,8460429..8460624,8461385..8461451,8461847..8461891)
Genome browser
AA seq
136 aa
AA seq
DB search
MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGHIWIEPSLRVLAYKHNINKMVCRKCYATLPPRATNCRKKKCGHS
NQLRPKKVRWCRYFNF
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctgacggggaagaccatcaccctcgaggtggagaacagc
gacgccgtcgccaacgtcaaggccaagatccaggacaaggaaggtatcccgccggaccag
cagcgcctcatcttcgccgggaagcagctggaggatggccgcacgctggccgactacaac
atccagaaggagtccacgcttcacctggtgcttcgcctacgcggcggccacatctggatc
gagccctcgctcagggtcctcgcctacaagcacaacatcaacaagatggtctgcaggaag
tgctatgcaactctgcctcccagggctacaaactgccgcaagaagaagtgtggccacagc
aatcagctgaggccaaagaaggtgaggtggtgcaggtacttcaacttctga
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integrated database retrieval system
