Oryza sativa japonica (Japanese rice): 4332393
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Entry
4332393 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4332393
04121 Ubiquitin system [BR:
osa04121
]
4332393
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4332393
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
4332393
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4332393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Prok-RING_1
zf-RING_16
HypA
DUF7129
FAR1_N
Rad50_zn_hook
zf-Nse
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
4332393
NCBI-ProteinID:
XP_015628012
UniProt:
B7ED73
Q84Q81
LinkDB
All DBs
Position
3:9134916..9135755
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AA seq
279 aa
AA seq
DB search
MASSPVSYWCYHCSRFVRVSPSTVVCPECDGGFLEQFPQPPPRGGGGSGRRGAMNPVIVL
RGGSLSGFELYYDDGSGDGLRPLPGDVSHLLMGSGFHRLLDQFSRLEAAAPRPPASKAAV
ESMPSVTVAGSGAHCAVCQEAFEPGASAREMPCKHVYHQDCILPWLSLRNSCPVCRRELP
AAAAPESEADAGLTIWRLPRGGFAVGRFAGGPREQLPVVYTELDGGFSNGVGPRRVTWPE
GDGHVDGGEGRIRRVFRNLFGCFGRSSRPESSSSQSRSG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctccggtgtcgtactggtgctaccactgcagccgcttcgtgagggtgtcg
ccgtccacggtcgtctgcccggagtgcgacggcggcttcctggagcagttcccgcagccg
ccgccgcgcggcggcggcgggagcggccggcgcggggcgatgaacccggtgatcgtgctc
cggggagggtccctgtccgggttcgagctctactacgacgacggctccggcgacgggctg
cggccgctgcccggcgacgtgtcgcacctcctcatggggtcgggcttccaccgcctgctc
gaccagttctcccggctcgaggcggcggcgccgcggccgccggcgtcgaaggcggcggtg
gagtcgatgccgtcggtgacggttgccgggagcggggcgcactgcgcggtgtgccaggag
gcgttcgagccgggcgcctccgcgcgggagatgccgtgcaagcacgtctaccaccaggac
tgcatcctgccctggctctccctccgcaactcatgccccgtctgccgccgcgagctaccg
gcggccgcggcccccgagtcggaggcagatgcgggactaaccatctggcgactcccacgc
ggtggattcgccgtcgggaggttcgccggtgggccaagggagcagcttccggttgtctac
actgaactggatgggggcttcagtaacggcgtcgggccgaggcgggtaacgtggccggag
ggcgacggccatgtcgatggcggcgaaggtcggattcgccgtgtatttaggaatctgttt
ggttgttttggtcggagcagtcggccggagagttcatcatcgcagtcccgtagtggctga
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