Oryza sativa japonica (Japanese rice): 4332412
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Entry
4332412 CDS
T01015
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4332412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4332412
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4332412
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
U-box type E3
4332412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Arm_2
KAP
zf-C3HC4_4
MLKL_N
zf-RING_UBOX
Neurochondrin
zf-C3HC4_2
zf-Nse
Z1
zf-C3HC4
T3SS_ATPase_C
Motif
Other DBs
NCBI-GeneID:
4332412
NCBI-ProteinID:
XP_015632795
UniProt:
Q10NB2
A0A8J8XL77
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All DBs
Position
3:join(9379978..9380385,9382952..9383068,9383204..9383629,9383718..9384947)
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AA seq
726 aa
AA seq
DB search
MDEEAKPNPNADAAPAAAEAAASSPPPLSSSESAEGKDKEEEKEEEEEEEAGDLVEKLVE
LVEEIAAISDFRNAYRRQFCNLSRRIRLLAPMLEEAKEGPRPLPDVSYSALRRLREALAD
SRELLRLGVSGSKISLVLEREKIMKSFQDITARLEQALGLISFDELDISDEVREQVELVH
AQFKRAKERSDPSDDDLFNDLVSVYNSSTSANVDPDILQRLSDKLQLATISDLNQESLIL
HEMASGGDPGAVVEKMSMLLKRIKDFVQSRDPEMGTPVNTTELSGKDNMASLIVPDDFRC
PISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQW
CEANGMEPPKRAAQHHNAPASCTAAEHSNVVELLQKLLSQNLEDQREAAGMLRQLAKRSP
ENRACIGDAGAIPILVSLLSITDVSTQEHVVTALLNLSIYEENKARIITSGAVPGVVHVL
KRGSMEARENSAATLFSLSLVDENKITIGASGAIPALVLLLSNGSQRGKRDAATALFNLC
IYQGNKGKAVRAGLIPVLLGLVTETESGMMDEALAILAILSSHPEGKTAISSANAIPMLV
GVIRNGSARNKENAAAVLVHLCNGEQQQQHLAEAQEQGIVTLLEELAKSGTDRGKRKAIQ
LLERMNRFLMQQSQAQAQAEAMAQAHAHAQSQAQVQALNEAQSQVEMQVEQLLLPTTSHL
SDRRDG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaagcgaagccgaaccctaacgccgacgcggcgcctgctgcagcggaggca
gcagcgtcttctccgccgccgctttcgagctcggagtcggcggaggggaaggataaggag
gaggagaaggaggaggaggaggaggaggaggcgggggatttggtggagaagctggtggag
ttggtggaagagatcgccgccatctcggacttcaggaatgcataccggcggcagttctgc
aacctgtcgcggcggatccggctgctcgcgcccatgctggaggaggccaaggaggggccg
cggccgctgccggatgtgtcgtattccgctctccggcggctcagggaggcgctcgctgac
tccagggagctcctccggctcggcgtcagcggtagcaagatctccctggttcttgagaga
gagaaaataatgaagtctttccaggatattactgcaaggcttgaacaagccttaggttta
atctcatttgatgaacttgacatatcagatgaagtaagagaacaggttgaattggtacat
gctcagttcaaaagagctaaagaacgatctgatccatctgatgatgatctctttaatgat
ttggtgtccgtctacaactcaagcaccagtgctaatgttgacccagatattctccagagg
ttatctgacaagttgcagcttgccactatatcagacctcaatcaagaatcattgatcttg
cacgagatggctagtggcggtgatcctggtgccgttgttgagaagatgtcaatgctgcta
aaaagaatcaaggattttgtgcagagtcgagatcctgaaatgggaaccccagtaaatacg
acagaactttcgggaaaagacaacatggcatctctgattgttccggatgatttccgttgc
cccatatcgctggatttaatgaaagatccagttattgttgccactggacagacttatgag
cgaggatgcatagagagatggttggaggctgggcatgacacctgtccaaagacacagcag
aagcttcccaataaatctctaaccccaaattatgtcttacgcagccttatagctcaatgg
tgtgaagcaaatggtatggagccaccaaaacgtgctgctcaacatcataatgcaccagca
tcatgtaccgctgctgaacatagcaacgtcgttgagcttcttcagaaattattgtcacaa
aacctagaagaccagcgtgaggctgcaggtatgcttcgtcagcttgccaagcgcagtcct
gaaaatcgtgcttgtataggagatgctggtgctattcctattcttgttagcctgctatct
ataactgatgttagcactcaagagcatgtagttactgctctcttgaatctttcgatatat
gaagagaacaaggcaagaataatcacctctggagctgttcctggagtagttcatgtgttg
aagaggggaagcatggaggctcgggagaattcagctgccacactgttcagtctttcacta
gtagatgagaacaaaataacaattggggcttctggggcaattccagctcttgtgcttctg
ttgagtaatggaagtcaacggggtaaaagggatgcagctacagccctatttaacctgtgt
atctatcagggcaacaagggcaaagctgttagagctggattgatccctgtactattagga
ctagtcactgagactgaaagtggtatgatggatgaggcccttgctatattggcaattctc
tcgagccatcctgagggcaagactgcaattagttcagccaacgccattccaatgctagtt
ggagtaatcagaaatggatcagcaaggaacaaggaaaatgctgctgctgttctggtgcat
ctctgcaatggtgaacagcagcaacagcatcttgctgaagcgcaggagcagggaattgtg
accctgttggaggaactagccaaaagtggcacagacagaggaaagaggaaagcaatccag
cttcttgagcgaatgaatcggtttcttatgcagcaaagtcaagcccaagcccaagcagag
gccatggcacaagctcatgcgcatgcacagtctcaagctcaggttcaggctcttaacgaa
gctcaatctcaggtagagatgcaggtggagcaattgttgcttccaactacttcacatctt
tctgatagacgagacggttga
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