Oryza sativa japonica (Japanese rice): 4332425
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Entry
4332425 CDS
T01015
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 isoform X1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00541
Biosynthesis of various nucleotide sugars
osa01100
Metabolic pathways
osa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
4332425
Enzymes [BR:
osa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
4332425
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
4332425
NCBI-ProteinID:
XP_015630773
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Position
3:join(9496391..9496393,9496738..9498321,9498417..9498869)
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AA seq
679 aa
AA seq
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MQAKMAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPS
PNFKFVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE
ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS
YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE
VVLHKGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQK
LKKLGWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLPHPRMLMTPGVERHNWTDEIKS
LSTSPDEAKESSTAVPAATAKSTSSAPQKASYKFLIYGRTGWIGGLLGKICEKQGIPYEY
GKGRLEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVC
REQGLLMINYATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSYYSKTKAMVEELLQEYDNV
CTLRVRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNF
TNPGVVSHNEILEMYKKYLNPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKSEFPELLS
IKDSLVKYVFEPNRKVPAN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgaagatggcggcttacgagcccaagaacattcttataaccggcgctgctggt
ttcatcgcatcacatgtggcgaaccgcctagtcaggaactatccgcactacaagattgtt
gtcctcgacaagctcgattactgttccagcctgagcaatctcaacccttcacgtccatcg
ccgaatttcaagtttgtcaagggtgacattgcaagtgctgatctggtgaactaccttctc
acaactgagtcaattgacactatcatgcactttgctgctcagactcatgtggataattca
tttggcaattcctttgagtttacaaagaacaatatttatggtacccatgtccttcttgag
gcctgcaaggttactggtcagattagaagatttattcatgtgagtactgacgaggtgtac
ggagaaactgatgaggatgctgtggttggcaaccatgaggcctcacagctgcttccaaca
aacccatattcagctacaaaagctggggctgagatgcttgtgatggcttatggaagatct
tatggccttcctgtgattacaactcggggcaacaatgtatatgggccaaatcagttccct
gagaagctcattcccaaatttattcttttggcaatgagaggcttgccccttcccattcac
ggtgatggctcaaatgtcagaagctatctgtattgtgaggatgttgctgaagcttttgag
gtggttcttcacaaaggagaggttgggcatgtgtacaatattggtactgtgaaggaaagg
agggtgattgatgtggccaaggacatatgcaagctctttggcttggacaccgagaaggtc
atcagatttgttgagaacaggcctttcaacgaccagagatacttcttggatgatcagaag
ctgaagaaattgggatgggcagagcgcacactatgggaagaggggttgaagaaaacaatt
gaatggtacactaacaatcctgattactggggagatgtcgcaggtgccttgctccctcat
ccaaggatgttgatgacacctggagttgaaaggcataactggactgatgagatcaaatct
ctttccacttcaccagatgaagctaaggaatctagcactgcggttcctgcagccactgcc
aaaagcaccagcagtgcccctcaaaaggcctcatacaagttcttgatatatggtaggact
ggatggattggtggtctacttggtaagatatgtgagaagcaagggattccatatgagtat
gggaaaggacgcctggaagagcgctctcagctcttgcaggacattagaaatgtgaagcca
actcatgttttcaatgctgctggtgtcactgggaggccaaatgttgactggtgcgagacc
cataaacaggatactatccgcaccaatgttgttggcaccttgaaccttgctgatgtttgt
cgtgagcagggcttgctcatgattaattatgctacaggttgcatatttgagtatgatgct
aagcaccccgaaggatcaggaattggttttaaagaggaagataagcccaactttactggt
tcatattattccaaaactaaagctatggttgaagagctgttgcaagaatatgacaacgtc
tgtacgcttcgagtcaggatgcccatatcatcagatttgagcaacccccgtaacttcatc
acaaagatagctcgttatgacaaggtggtaaacatccccaacagtatgacaattttggat
gagcttttgcccatctccattgagatggcgaagcgggactgcaggggcatatggaacttc
accaatcctggggttgtcagccacaacgagatcctggagatgtacaagaaatacctcaac
cccgacttcaagtggaccaacttcactcttgaggaacaggccaaggttatagttgcacca
agaagtaacaacgaaatggatgcatcgaagttgaagtccgagttccccgagctactgtcc
atcaaggattctttggttaagtatgtttttgagccaaacaggaaggttcctgctaactga
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