| Entry |
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| Name |
(RefSeq) polyadenylate-binding protein 7
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| KO |
| K13126 | polyadenylate-binding protein |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4332428
09123 Folding, sorting and degradation
03018 RNA degradation
4332428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:osa03019]
4332428
03041 Spliceosome [BR:osa03041]
4332428
Messenger RNA biogenesis [BR:osa03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4332428
mRNA cycle factors
Stress granule specific factors
4332428
Spliceosome [BR:osa03041]
Complex C
Other components
Complex C specific factors
4332428
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:join(9511800..9512073,9513070..9513188,9513271..9513464,9513559..9513815,9513929..9514035,9514100..9514289,9514380..9514666,9514744..9514875,9515161..9515340,9515447..9515650)
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| AA seq |
647 aa
MAAQEMEVMMVAMAAEAPVAVEVEAVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGK
IGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLILDKPIRVMWSNRDPDA
RRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESAD
ASIQNLNNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYG
LVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQY
LQRLHEEKRNEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKG
FGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSP
VIPTGYPQFYFAHPSTHLPQSPGRQGFMYPPIGISQEWRHNMFPSSHNIQQIHSPIMRNT
PRQYRNNRGRMNGNMMHFHHTVNYVPHAQPAKEFMSMSRQRFSHAKYIPNDIMANGLAIH
HGDSISSMNDAFNNLLATAPPEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVV
MLLYSSNMLSAKIEECVKLLQEVKPKPEDQEALHPGFLLDSAGVNAN |
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| NT seq |
1944 nt +upstreamnt +downstreamnt
atggccgcgcaggagatggaggttatgatggttgcgatggcggcggaggcgccggtggct
gtggaggtggaggcggttccggcggtggcgggggggctaaacgcgacggtgcccgcgttg
tacgtgggcgatctccacgaaagcgtgcgggaggagcacctgctcgaggtgttcggcaag
attggcaccctcacgtccgtgcgcgtctgccgcgacaatgccacgagcaactccctcaga
tatggatacgtgaattacctctcccaggctgacgctgcaattgctttggagaaactaaat
catagtcttattttggataagccgatcagagtaatgtggtctaaccgagatccagatgct
aggagaagtggggttggaaatgtgtttgttaagaatcttaatgatttagttgacaatgta
agtctacaagaattattttgcaagtttggagatatattatcttgtaaagtcgctaaaaat
gaggatgggacaagtagaggctatggatttgttcaatttgcgttgcaagaatcagcagat
gcatcaattcaaaatcttaacaactctcatttttgtggcaggcaattgcatgttgctaca
tttattaagaagagtgaacgatctacaaacaatgatgacaaatatactaacctatacatg
aagaaccttgatgatgatataacagaggaacttattaagttaaagttctctcagtatggt
ttagtaattagtgtaaagataatgaaaagagatgatgggacatctaagggctttgggttt
gtaagttttcaaaacccagaaagtgccaaaagagcaaaagaatccatgaacgggatgcta
cttggatcaaaaaccttgtatgtagcaagagctcaaaagaaagctgaaaggaaacaatat
ttgcaacgcttacacgaggagaagagaaatgaaataatcaccaagagcaatgggtcgaat
gtctatataaaaaatattaatgatgaagttggcgacgatgctctccgtgaacggttcaat
gaatttggaaacattacatcagcaaagattatgcgtgatgaaaagggtattagcaaagga
tttggatttgtatgttacaacacacctgaggaagcaaaatgtgctgtaagcaacatgcgt
ggtgtaatgttttatggcaaaccattgtacgttgctattgctcaaaggaaagaggaaaga
cgagccaaactagagcaacgttttgctgagcttgcaacgatggttggagctacaagtcct
gtcatacccacaggatatcctcaattttactttgcccaccctagtacacatctccctcaa
agtccagggagacaaggatttatgtatccacccatagggattagtcaagaatggaggcat
aacatgtttccctcgtcacataatatccaacaaatacattcaccgattatgcgaaatact
ccacggcaatacagaaacaacaggggaaggatgaatggaaatatgatgcattttcaccac
actgtgaactatgttccacatgcgcagccagctaaagaattcatgtccatgtcccgacag
cgatttagccatgctaagtatattccaaatgacatcatggccaatggattggctattcat
catggtgactctatttcatcgatgaatgacgcttttaacaacctgctagctactgctcca
cccgaggaacagaagaacatgcttgggaatagactatatccgttggttgagagacatcat
cctgaccttgccagtaaaatcactggaatgttacttgagctaggtaattctgaagtggtc
atgctactttactcatcaaacatgttgtctgccaaaatagaggagtgtgtcaaactgctc
caagaggtaaaacccaaacctgaagatcaagaggccctgcaccctggtttcctcctagac
tctgctggtgtaaacgccaactaa |
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