Oryza sativa japonica (Japanese rice): 4332468
Help
Entry
4332468 CDS
T01015
Symbol
SPO11-3, OsSPO11-3, OsSPO11C, OsTOP6A, OsTOP6A3, TOP6A, TOP6A3
Name
(RefSeq) topoisomerase 6 subunit A3
KO
K10878
meiotic recombination protein SPO11
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4332468 (SPO11-3)
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
4332468 (SPO11-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
fvmX7
Motif
Other DBs
NCBI-GeneID:
4332468
NCBI-ProteinID:
NP_001389063
UniProt:
Q0DSV9
LinkDB
All DBs
Position
3:9848028..9849356
Genome browser
AA seq
442 aa
AA seq
DB search
MSEKKRRGGAGAGAASGSASKKPRVSTAASYAESLRSKLRPDASILATLRSLASACSKSK
PAGSSSSSSSASKALAAEDDPAASYIVVADQDSASVTSRINRLVLAAARSILSGRGFSFA
VPSRAASNQVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHVTK
RDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFADDGDRIDC
TRMGVGGKAIPPNIDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPD
VATRLFLRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVR
PSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRTRQKAEIQALS
SFGFQYLTEVYLPLKLQQQDWI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaagaagcgccgcggcggggcaggcgcgggggccgcgtcgggctccgcctcc
aagaagccgcgggtctccacggcggcgtcgtacgccgagtcgctccgctcgaagctccgc
cccgacgcctccatcctcgccaccctccgctccctggcctccgcctgctccaaatccaag
cccgcggggtcgtcgtcgtcgtcgtcgtccgcctcgaaggcgctcgcagccgaggacgac
ccggccgccagctacatcgtggtggccgaccaggactccgcctccgtcacctcccgcatc
aaccgcctcgtgctcgccgcggcgcgcagcatcctgtccggccggggcttctccttcgcg
gtgccctcccgcgccgcctccaaccaggtctacctcccggacctcgaccgcatcgtgctc
gtccgccgcgagtccgccaggcccttcgccaacgtcgccaccgcgcggaaggccaccatc
accgcgcgcgtcctctccttggtccacgccgtcctccgcagggggatccacgtcaccaag
cgtgacctcttctacaccgacgtcaagctcttcggcgaccaggcgcagtccgacgccgtc
ctcgacgacgtctcctgtatgctcggctgcacccgctcctccctccacgtcgtcgcgtcc
gagaagggcgtcgtcgtcgggcgcctcaccttcgccgacgacggcgaccggatcgactgc
acgcgcatgggcgtcggcgggaaggccatcccgcccaacatcgacagggtctcaggcatc
gagagcgacgctctcttcatcttgctggtggagaaggacgccgcgttcatgcgtctcgcc
gaggaccggttctacaaccgcttcccgtgcatcatcttgacggcgaaggggcagccggat
gtcgccacacggctgttcttgcggcggcttaaggtggagctgaagctgccggtgctggca
ttggtggactccgacccatatgggctgaagatcttgtcagtgtacatgtgtggttccaag
aacatgtcatatgacagtgccaacctgacaacaccggatatcaagtggctcggagtgcgg
ccaagcgatctggacaagtatcgggtgccggagcagtgccggcttccgatgactgatcac
gatatcaaggtggggaaggagctgcttgaggaggactttgtgaagcagaatgaaggatgg
gtgaaggagctggagacgatgttgcggacgaggcagaaggctgagatacaggctctcagt
tcatttggtttccagtatctcactgaggtctatctacctctcaagctgcagcaacaggac
tggatttga
DBGET
integrated database retrieval system
