Oryza sativa japonica (Japanese rice): 4332476
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Entry
4332476 CDS
T01015
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
KO
K12896
serine/arginine-rich splicing factor 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4332476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4332476
Spliceosome [BR:
osa03041
]
Common components
Common spliceosomal components
SR proteins
4332476
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
RRM_5
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
4332476
NCBI-ProteinID:
XP_015630497
UniProt:
B9F7Q3
Q10N19
LinkDB
All DBs
Position
3:complement(join(9903690..9904143,9904276..9904371,9904473..9904672,9904810..9904905,9905024..9905063,9905776..9905882))
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AA seq
330 aa
AA seq
DB search
MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDPRDADEA
RYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGHGRSRSYSRSRSRSYS
RSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERNPSPNGRRSPRSPQDR
VSPPPKDNDERNGDSPWGRENSRSPSDGYRSPVAANGRSPSPRNNGSPSPMDNNSRSPRD
NGSPSPRDGNGDGGSRGGSRSPRASESPEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgtcttcg
cgcactcgttctcgtgacctagaatatcttttcggcagatatggaagaatacgtgaagtg
gagttgaagcgcgactacgcgtttattgaattcagtgatccccgtgatgctgatgaagcg
cggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgctaaa
ggagttccacgtggtgctgctggtggttcacgtgaatatatggggagaggacctcctcca
ggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagagactgcaaggct
ggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacatagaaagaaactgc
caaaacagtccaagaaatctcaggcgagagagaagttattcgcgctccccatcgccacgc
cgtggacgtggtcatggtcgtagtcgtagctatagccggagccggagcaggagttacagc
cgatctaggtccagatccctatctggatctcccaggggacgcagagatcgtgatgatagg
agatcaaggagtcttagctacagcagaagtcccaggcgatccatctccccagcagcaaat
ggaaaggagcgcaaccccagcccgaatggtaggcggagtccaaggagtccacaggatcgg
gtaagcccaccacccaaggataatgatgagcgcaatggtgacagcccctggggcagggag
aacagcaggagcccatctgacggctaccgtagccctgtggctgccaatgggcgcagccca
agcccaaggaacaatggaagccctagtccaatggacaacaatagccgaagcccaagggac
aacggcagcccgagccctagggatggaaatggtgatggtggtagccgtggcggctcacgc
tcgcccagagcaagcgagtcccctgaagcttga
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integrated database retrieval system
