Oryza sativa japonica (Japanese rice): 4332566
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Entry
4332566 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4332566
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
4332566
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-GeneID:
4332566
NCBI-ProteinID:
XP_066164509
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All DBs
Position
3:complement(join(10606380..10606547,10607129..10607243,10607429..10607499,10607590..10607747,10607824..10607917,10608005..10608093,10608649..10608746,10608819..10608952,10609041..10609124,10609230..10609478))
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AA seq
419 aa
AA seq
DB search
MESNAEKLRGLTITSLDEEDDEPELPHRSPPASGGGGGGGAGYEDDDEEEEEEAEVTLGF
LEKPKHPGLLLRHLFPSKAGGIPAWLDPVNLPSGNSRCCGFCGEPLQFVLQIYAPIEDNA
ASFHRTLFMFMCPSMACLLRDQHDQWKHRQGNPCRSVKVFRCQLPRSNAFYSSEPPKHND
SDKPLCPGAPVCHWCGTWKGDKLCSSCKKARYCSEKHQTLHWRSGHKSDCLQLISSSEAS
SSIFPAVGKVPASKSWPEYEIAIDYEGAFNSDSCDESNSKSLVMQRPGKPDDMMQSWMDQ
FEADADNKCWASFQERVSRAPKQVLRYCREENAKPLWALSAGCPSNADIPSCSYCRGPLC
YEFQIMPQLLYYFGVKNEPDSLDWATIVVYTCKGSCDQNVSYKEEFAWVQLYPTTTTRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacgccgagaagcttcgtggtctcaccatcacctcgctggatgaggaagac
gacgagcccgaactgccccaccgatccccacccgccagcggcggcggcggaggcggcggc
gcgggctacgaggacgacgatgaggaggaggaggaagaggcggaggtgacgcttggtttt
ctggagaagccgaagcacccgggcctcctcctccgccacctgttccctagcaaggccgga
ggcatcccggcgtggttggatcctgtgaacttgccatcggggaactcgcgttgctgcggc
ttctgcggcgagcccctgcagttcgtcctccagatatatgcaccgattgaggacaatgcg
gcatcatttcaccgcactttgttcatgttcatgtgcccgtcaatggcatgcttactccga
gaccagcacgaccagtggaaacatagacaaggcaatccgtgtagaagcgtgaaggttttc
cggtgccagcttccccgtagtaatgccttctactcaagtgaaccaccaaagcacaatgat
tctgacaagccactatgtccaggagctcctgtctgccattggtgcggtacatggaaaggt
gataaactctgtagtagctgcaagaaagcacgctactgctctgagaagcatcagacactg
cactggcgctctggccataagagtgattgcctacagttaatcagttcttctgaagcttca
agctctatttttcctgctgtaggaaaagttcctgctagcaaatcttggccagaatatgag
attgcaatcgactatgagggtgctttcaattctgacagttgtgatgagagtaactcaaag
tccttggtgatgcaaagacctggtaaaccagatgatatgatgcagtcatggatggatcaa
tttgaggctgatgctgacaacaaatgctgggcgtcttttcaagagcgggtctcaagagca
ccaaagcaagtattgagatactgtcgagaagagaatgccaaacctctatgggcgttatcg
gctggttgtccatcaaatgccgatatcccatcatgtagctactgtagaggtccactatgc
tatgaatttcagataatgccacagctgctttattactttggtgtgaaaaatgagccagac
tctcttgattgggcaacaattgttgtgtacacatgtaaaggatcatgcgatcaaaatgtc
agctacaaggaggaatttgcatgggttcagttataccctacaacaaccacaaggtcatga
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