KEGG   Oryza sativa japonica (Japanese rice): 4332806
Entry
4332806           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4332806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4332806
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4332806
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_YTH1 RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 4332806
NCBI-ProteinID: XP_015633039
UniProt: Q10LL5 A0A8J8YLK6
LinkDB
Position
3:join(12870293..12870379,12870790..12870855,12870971..12871045,12871128..12871236,12871327..12871373,12871470..12871527,12872267..12872316,12872533..12872589,12872673..12872758,12872832..12872933,12873997..12874030,12874123..12874197,12874284..12874298)
AA seq 286 aa
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE
ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG
HIRVKEYDGKRARSYSRSRSPSRSRSKSRSLSKSPRTRRSASRSRSRSRSVSSRSRSASK
GRSPSRSPARSKSPNASPANGEASSPKKRSPSRSPSRSRSPDAKSE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagggag
agggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaagatc
cctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgctgaagaa
gcatgtgctggcagggatggttataactttgatggacatcgtctaagggttgaacctgct
cacggtgggagaggtaatggtggttcctcctttgaccgccccagcaactttggtggtgga
ggacgccgtggtgtgtccaggcactcagaataccgtgttctggttactggtttgccttct
tctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtgatgtttgtttctca
gaagtgtatcgcgagggcggcggtactgtagggattgtggactacacaaactatgatgac
atgaaatatgctataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggt
cacataagggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagc
ccaagtcgtagccgaagcaaaagcaggagtctaagtaaatctcctagaactcgccgttca
gcatcccgatctcgatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaa
gggcgctctccatcaagatcaccagcaagatccaaatctccaaatgcttctcctgcaaat
ggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacggtct
cctgatgcgaaatctgaatag

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