KEGG   Oryza sativa japonica (Japanese rice): 4332834
Entry
4332834           CDS       T01015                                 
Name
(RefSeq) nuclear pore complex protein NUP93A
  KO
K14309  nuclear pore complex protein Nup93
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4332834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4332834
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4332834
SSDB
Motif
Pfam: Nic96 TPR_12 TPR_2 TPR_8 TPR_1
Other DBs
NCBI-GeneID: 4332834
NCBI-ProteinID: XP_015632533
UniProt: Q10LH9 A0A8J8XSH5
LinkDB
Position
3:complement(join(13156456..13156533,13157234..13157525,13157622..13157800,13158090..13158992,13159071..13159157,13159667..13159750,13159881..13159934,13160429..13160560,13160690..13160785,13161034..13161303,13163315..13163404,13163493..13163552,13164546..13164612,13164754..13164845,13164963..13165091))
AA seq 870 aa
MAGVGGSSSGGGDVEMGGWSELLHSSTKLLEQAAPTPHFPPLQRNLDQLEVLSTKLKAKT
VRAEAPVQSLSATRLLAREGINAEQLARDLKSFELKTTFEDVFPSEATTVEEYLQQLHEM
AIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLMASGISR
PALMPSSASSPQSSSGLPSKEVMPIPNKTIIENKSSVYAAVVRDLNDARGRSLPFGPATA
FRAAYESLSVGAIGTKSVTMHKVWHLIQALVGEGSTHRNISRKMSLVIGARRHLEWGHEK
YILETINSHPALAALGGSVGNLQKIRAFLRVRLRDHGVLDFDATDLRRQPPVDTTWQQIY
FCLRTGYYDEARQVAQSSRAAFNFAPLLVEWITTNGAVSPETALTASEECDKMLRMGDRP
GRPGYDRKKLLLYAMICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYTSASSSNVS
NEGLVPYTLEDLQSYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAILYLSKEVGEEGY
HVDAVHISIALSDHGVLPDGVGSGQKMGIMDACAEAASIIRQYGSIYLRNGNLDLALEYY
AQSAAAMGGGEVSWIGRGNADQQRQRNLMLKQLLTEILLRDGGIQLLLGPSGMGEEGELK
KYMMDWRSRQQFLLEAAHQCHEAGLYDKSVEIHKRVGAFAMALQTINKCLSDAICAMARS
MLDGESRAAALIHSGNEIMETARYSEASVQDKDLISEQQTVLRQLEAILHIYRLARAGQT
LDALRETIKLPFLHLDPQAPNVTVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLR
AVKSKIANLVASNMSRNWPQDLYQKVAQCI
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggccggcgtcggcggcagcagcagcggcggcggcgacgtggagatgggcgggtggtcg
gagctcctccactcctccactaagctcctcgagcaggccgcccccaccccgcacttccct
cccctccagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacg
gtgcgcgccgaggcgcccgtgcagtcgctctccgccaccaggttgttggcgcgcgagggg
atcaatgcggagcagctcgccagggacctcaaatccttcgaacttaagaccacatttgag
gatgtttttccatctgaagcaactactgtcgaggagtacctgcagcagcttcatgaaatg
gcaatcgtctcatccattcaagaagcacaaaaggacaacttaaggagttttaacaattat
atgatgcaagttctcgaggatgattggcagaaggagaagcgagacttcttgcagagtcta
agccgactctctacattaccgaaaagaaacactaatctcatggccagtgggatttctcgt
cctgctctgatgccatcttcagcttccagtccccaatcttcgtccggtctgccatctaag
gaagtcatgcccatacctaacaaaactataattgaaaacaaatcttcagtttatgctgca
gttgtgagagatcttaatgatgctagagggcgcagcctaccttttggtcctgctacagca
ttcagggctgcttatgagtctttatctgttggtgctattgggacaaaatcagtgaccatg
cataaagtgtggcatttaattcaggcattagttggggaagggtcaactcatcgaaacatt
tcaagaaaaatgtcactagtgattggtgctagacgacaccttgagtggggtcatgaaaag
tacatacttgagaccatcaatagccatccggctctagctgctcttggtggatctgttggc
aatcttcagaagattcgcgcatttcttcgggtccgtttgcgggatcatggtgtgctagac
tttgatgcaactgatctgcgtagacagccaccagtggacacaacatggcaacagatttat
ttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcatctcgtgct
gcattcaactttgctcccctgcttgtagaatggattactactaatggtgctgtatcccca
gagactgctctgacagcttctgaggaatgtgacaaaatgctgagaatgggtgatcgacct
ggccgtcctggttatgataggaagaagttgctcctttatgccatgatctgtggttgtcga
cgtcaaatcgacagattgcttaaagatctgccaacacttttcaatactatagaggatttc
ttgtggttcaaattgtcagctctgcgggagtacaccagtgcatcttcttctaatgtttca
aatgaaggcttggtgccttatactctggaggatctgcaaagttacttaaacaaatttgaa
ccatcatattatacaaagaatggaaaagaccccttggtctatccatatgttctgctgtta
agcatccaattgcttccagcaattctttatttgtctaaagaagttggagaggaaggatac
catgtagatgctgtgcatatttcaattgctttatctgatcatggtgttctccctgatggt
gttgggtcaggccagaagatgggtatcatggatgcttgtgcagaagctgccagtataata
cggcagtatggctctatttatttgcgtaatggtaaccttgatttggccttggagtattat
gcacagtctgctgctgcaatgggtggaggagaggtatcatggattggtcgagggaatgct
gatcagcagcggcagcgaaatctaatgttgaagcaactgctgacagagatattactaagg
gatggtggcattcaacttttgcttggtccaagtggaatgggggaagaaggagaattaaag
aagtatatgatggattggagaagcaggcagcaattcttacttgaagctgcccatcagtgt
catgaggcaggcctctatgacaaatcagtggaaattcataaaagagttggagcttttgcc
atggcacttcagacaataaataagtgcctgtcggatgcaatatgtgccatggcacgcagt
atgttagatggtgaaagtcgtgctgctgctctaattcattctggtaatgaaattatggaa
actgccagatattcggaagccagtgttcaagacaaggacctcatatctgagcaacaaact
gtactgagacagcttgaagctattctccatatctataggcttgctcgagctggacagact
ttagatgctttgagggaaaccatcaaactcccatttcttcatttggatcctcaggctcca
aatgtgacagttgatgtgttcagaaacttgtcaccgcatgttcaagcttgtgtgccagat
ctcttgaaggttgctctaaattgtatggacaatgttagagatactgatgggaccttgcgt
gcagtcaagtcaaagatcgcaaacctcgtggcaagcaacatgagcaggaactggccacag
gatttgtatcagaaggtggcgcagtgcatatga

DBGET integrated database retrieval system