Oryza sativa japonica (Japanese rice): 4332849
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Entry
4332849 CDS
T01015
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4332849
04121 Ubiquitin system [BR:
osa04121
]
4332849
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4332849
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
4332849
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4332849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
Zn_ribbon_GTF2H2
zf-RING_5
zf-ANAPC11
DUF7129
zf-RING_16
Zn_ribbon_6
HypA
Zf_IFT144_1st
DUF8054_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
4332849
NCBI-ProteinID:
XP_015633002
UniProt:
Q10LG3
B7EHY7
LinkDB
All DBs
Position
3:complement(13255235..13256086)
Genome browser
AA seq
283 aa
AA seq
DB search
MSGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDFHRDPRF
GIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRH
LSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSSTGAS
CSRTRSTNQSQSSSSNGRTNGRQRRRNPFSFLWPFRSSSSSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtaggcaatcatactggtgctaccaatgtagacagcgggtgaggccccgc
ggccaggatatggagtgtccctattgtgattccggttttgtgtctgaaatggatgatgtt
gatgctctcatgcgccactttgttgggatggatcctgatttccatcgtgatccaagattc
ggtatcatggaggcaatctctgctgtgatgaggcatggcatggcgggaacgaaccgggaa
gttgatgtgagaggaaggccaaacatattttctgacctggagatggagtttggctcaggg
ccatggttgctcttccgtggccagcttcctggtcatctctcagaagacaatggttttgat
gtattcatcaatggacgccgtggtgttggcatgcgcagagcaaacattgcagactacttt
gttggacctggactggatgatctgattgagcaattaactcagaatgatcgacgagggccg
ccacctgccactcaatcatcgattgatgctatgcctactgtgaagattacacagaggcat
ctcagtggagactcacattgccctgtctgcaaggacaagtttgagctgggatcagaagca
agggagatgccatgcaagcatttataccactctgattgcatagttccttggctggaacag
cacaattcctgccctgtttgccgatatgagttgccaccacagagctctactggtgctagc
tgctcgcgcacaagatcaaccaaccaaagtcagagttcaagtagcaatgggagaaccaat
ggacgtcaaaggagaaggaatccgttctcgttcctatggcctttccgatcatcaagctct
agctctcgttag
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