Oryza sativa japonica (Japanese rice): 4332931
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Entry
4332931 CDS
T01015
Name
(RefSeq) novel plant SNARE 13 isoform X1
KO
K08494
novel plant SNARE
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4332931
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
4332931
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Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
LMBR1
DUF6988
YkyA
Occludin_ELL
VBS_C3G9
DUF6376
Motif
Other DBs
NCBI-GeneID:
4332931
NCBI-ProteinID:
XP_015633327
LinkDB
All DBs
Position
3:complement(join(14866307..14866423,14866800..14866874,14866958..14867227,14867300..14867379,14867953..14868056,14868272..14868309,14868390..14868483,14868789..14868881,14869938..14870014))
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AA seq
315 aa
AA seq
DB search
MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIK
EFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA
GSSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALSQ
QVSFSTLHTIQDFPVTCLFWQSGILVCLVCNLVQQISFALQTEQMKRIGNELDTVHFSLK
KASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIVNPHNKNIRDIPGLAPPAQNFQ
ISNRRLLSVEIIRGL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagcccggagctcgagcagatcgacggcgaggtccaggac
atcttccgcgccctccaaaatggatttcaaaagatggacaagattaaagattcaagtagg
caagctaaacagctggaggatctcacagcaaaaatgaaggagtgcaagcgtttgatcaaa
gagtttgatcgtatattgaaagatgaggagtcaaacaaccctcctgaggtccacaagcag
ctaaatgacagaaagcaatatatgatcaaagagttgaattcctatgtcaccttgaggaag
acatatcaaagtagcctaggtaataataataagagggttgagctctttgatatgggcgct
ggaagtagtgaacctgctgccgaggacaacatccaaatagcatcagctatgacaaaccaa
caactgatggatgctggaagagaacaaatgactcagactgatcaagctattgaccgttca
aaaatggttgtggcacaaactattgaaactggaacacaaactgcttcagcgctatcacag
caagtaagtttttctacattacatactatacaagattttcctgtgacatgcctgttttgg
caatctggtatacttgtgtgtttagtatgcaatctagtacaacaaatctcttttgcttta
cagacagaacaaatgaagagaattggcaatgagctggatactgttcacttttcgttaaag
aaggctagccagctggtgaaagagattggccgtcaggttgcaactgacaaatgcattatg
gcattgctttttctgattgtttgtggtgtgattgcaattattgttgttaagattgtcaac
ccacataacaagaacatccgcgacatcccaggacttgctccgcctgctcaaaatttccag
attagtaacaggagactgctgtcggtagaaattatcagaggtctatga
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