Oryza sativa japonica (Japanese rice) (RefSeq): 4332999
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Entry
4332999 CDS
T01015
Name
(RefSeq) intron-binding protein aquarius
KO
K12874
intron-binding protein aquarius
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4332999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4332999
Spliceosome [BR:
osa03041
]
Complex B
Other components
Prp19-related factors
4332999
Complex C
4332999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aquarius_N
AAA_11
AAA_12
AAA_19
AAA_30
UvrD_C_2
AAA
DUF2075
AAA_22
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
4332999
NCBI-ProteinID:
XP_015631480
UniProt:
Q6AVE6
LinkDB
All DBs
Position
3:15410207..15419656
Genome browser
AA seq
1572 aa
AA seq
DB search
MPKVYGTGVFEFRHPRAAEYPLPADVPASAASAPDKAIPTAAASTITLLDIQRDRLTRVA
AEHWGAPTAGAAFDAALVREIYATELRVEGRGRKTVPLHRVMILEVSQYLENYLWPNFDP
AGASFEHVMSMILMVNEKFRENVAAWTCFHDRKDAFKGFLWRVLKLKEEDRELNMAEKTN
YLLFMINAFQSLEDELVRETILQLVSLKLWHTLSFGRLQMELCLNPELIKKWTKIKRKEA
KEAKKAGQTCDASEMLENRFLRNLIEEFLEILDSKVILSSQDGGDESVLNVSLSGQVDDY
CVLYCERFMEFLIDMLSQLPTRRFLRPLVADVAVVAKCHLSALYTHEKGRLFAQLVDLLQ
FYEGFEINDHSGTQLSDDDVLQAHYSRFQAFQLLAFKQVPKLRDFSLCNIGSIHKRADLA
KKLLVLTDVELQDLVCNKLKLISEEDPCSGRRDFLIEVLVAFFEKRQSQKDAVNALPLYP
NEQIMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEA
VPHLHAYINNEGDTAFRGWSRMAVPIKEFRITEVKQPNIGEVKPSAVTADVTFSISSYKP
QIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQCVRGCEVIEIRDEEGS
LMNDFTGRIKREEWKPPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKP
KENNFKAILESIRDLMNETCVVPEWLHNIFLGYGNPSAAQWINMPDLLENIDFKDTFLDA
DHVVQSFPDYQVTFINSDGTENLNPSPPFKIKLSKKMRESSHALPGNVNSVLSAKNNMVD
DDGPQKEKIMVETYIPADPGPYPQDKPKQNSVRFTPTQIGAIISGIQPGLTMVVGPPGTG
KTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELAT
DLDFSRQGRVNAMLVRRLELLGEVAKLASSLHLPEDVSYTCETAAYFWLLHVYARWEQFL
AACAQNQDKPSFVKDRFPFSEFFSDTPQPTFTGESFEKDMHAAKGCFKHLLTIFQELEEC
RAFELLKSTAERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIE
TFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGVPYI
ELNAQGRARPSIAELYNWRYRELGDLPYVREEAIFHKANSGFSYDYQLVDVPDFRGRGES
APSPWFYQNEGEAEFIVSVYIYMRLIGYPANKISILTTYNGQKLLIRDVINRRCKPWNIE
PPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSLFEQ
CYELQPTFQLLLQRPDKLGLNLEECTPFTERPLEETGNIHYVAGIEDIGHLVNFRLEHLR
QMQYMQYYAPHANVPPSAVPENNADATENGNAGNGMHKANDVMAEENGDAVMRNKMEEDT
IDTMQEENKMDGKNPEANDMAMEEKTVDGDDDPKNKMEEGNTEAKNKMEEGNTEAKDKME
EENDVAKNNMEE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtctacggcaccggcgtcttcgagttccgccacccgcgcgccgccgagtac
ccgctcccggccgacgtcccggcctccgccgcgtcggcgcccgacaaggccatccccacc
gccgcggcctccaccatcacgctcctcgacatccagcgcgaccgcctcacccgcgtcgcc
gccgagcactggggcgcgcccaccgcgggggccgccttcgacgccgccctcgtcagggag
atctacgcgaccgagctccgggtcgagggccgcggccgcaagaccgtcccgctccaccgc
gtcatgatcctcgaggtcagccagtacctcgagaactacctctggccaaacttcgacccg
gccggcgcctccttcgagcacgtcatgtccatgatcctcatggtcaacgagaagttccgg
gagaatgtggcggcgtggacctgcttccatgaccggaaggatgctttcaagggattttta
tggcgggttctcaagctaaaggaagaggatagggagcttaatatggccgagaaaacaaac
tacctgttgttcatgataaatgcgtttcagagtttggaggatgaactagttcgagaaacc
atacttcagttagtaagcctaaagttgtggcatactctttcttttggacggcttcagatg
gagctttgccttaaccctgaattgattaagaagtggaccaaaatcaaaagaaaagaagct
aaagaagcaaaaaaggcaggtcaaacctgtgatgcttcagaaatgctcgagaatagattc
cttaggaacttaatagaagaattcctggagattcttgattcgaaggtaatattgtccagt
caagatggtggggatgaatctgtgttgaatgtatcactcagtgggcaggttgatgattat
tgtgtcttgtactgtgagagattcatggagtttttgattgatatgttgagccagcttcct
actagacgatttttaaggccccttgttgccgatgtagctgttgttgctaagtgtcactta
agtgcactgtatacccatgaaaaggggcgtctttttgcgcagttggttgatttgctgcag
ttttatgaaggctttgagattaatgatcattctggaacacagctcagtgatgatgatgtc
ttgcaagctcattattcccgtttccaagcctttcagctgctggccttcaaacaagtgcct
aagttgagagatttttccttgtgtaatattggttcaatccataagcgtgcggacttagca
aagaagctgcttgtcttgacagatgtagaactgcaagatctggtttgtaataagctcaag
ttaatttcagaggaggacccatgcagtggaagacgtgattttcttattgaggtcctggtt
gccttttttgagaagcgtcagtcacagaaagatgcagtaaatgcacttcctctttatcca
aatgaacagatcatgtgggatgaaagccttgttcctagcattaattattctggagagggc
tgccttgctctcccaaaactcaatctccagtttttaacacttcatgattatttattgagg
aatttcaatcttttccgccttgaatcaacatatgaaattcgtgaagacatccaggaagct
gttcctcatctgcatgcctatattaacaatgagggagacactgcctttcgtggttggtcc
aggatggctgttccaatcaaggaatttaggattactgaagtgaagcagccaaacattgga
gaagttaagccatctgctgtaactgctgatgtcactttcagcatctcaagctacaagcca
cagatcaaatctgaatgggatgctttgaaggaacatgatgttttatttttgttgtcgatc
cgtccatcttttgaaccccttagccctgaggaggctgcaaaatcaactgtgccagaaagg
cttggattacaatgtgtacgtggatgtgaggttattgaaattcgtgatgaggaaggatct
cttatgaatgattttacagggaggataaagagagaggaatggaaacctcccaagggtgag
attcgtactgttaaaattgctttggatacagctcagtatcatattgatgttactgaggta
gcagagaagggtgcagagaatgtgtatgggacatttaacattctaatgagaaggaaaccc
aaggagaataatttcaaagcgatattggaatctatacgtgatctaatgaatgaaacatgt
gtagttcctgaatggttgcataacatattcttgggttatgggaacccttctgccgcacag
tggataaatatgcctgatcttctggaaaatatagattttaaggacacttttcttgatgcg
gaccatgttgtacaaagctttccagattaccaggtcacatttatcaattcagatggaaca
gaaaacctgaatccgagccctccttttaagattaagttgtccaagaaaatgagggaaagt
agtcatgctctacctggcaatgtaaactctgttttgtcggctaagaacaatatggttgat
gatgatgggccccagaaagaaaaaataatggttgagacttatattcctgctgatccaggg
ccgtatcctcaagataaacctaaacagaactcagtgaggtttacacctactcagattggt
gctataatatctggtattcaacctgggttgacaatggttgttggtcctcctggtacggga
aaaacagatacagctgtgcagatattgaatgttttatatcacaactgtccttcccaaaga
actctaattataactcattccaatcaagctttgaatgatttgtttgagaagataatgcag
agagatgtgcctgctaggtaccttcttcgtcttggtcagggtgaacaagagttggcaact
gatctcgattttagccgtcaaggtcgtgtcaatgctatgctggttcggcgattagagctg
ctaggtgaagttgcaaaattggcaagttcccttcatcttcctgaagatgtgagctacaca
tgtgaaacggctgcatacttttggttattacatgtttatgctcgctgggaacaattttta
gctgcctgtgcgcaaaaccaagacaagccctcatttgttaaagaccgcttccctttctca
gagttcttctcagatactccacaacctaccttcactggtgagtcctttgagaaagatatg
catgcagccaaaggttgtttcaaacatcttttgacaatatttcaagagctggaagaatgt
agggcttttgagctacttaagtcaacagcagagagggcaaattatctaatgaccaaacaa
gccaagattgttgccatgacttgtactcatgcggcattgaagaggagagactttcttcag
ttagggttcaaatacgataatttgctgatggaagaaagtgcacagatattagagatagag
actttcataccgatgctgctgcaacggcaggaagatggctatgctcgtctgaaacgttgc
attttaattggtgatcaccatcagttaccccctgtcgtgaagaacatggcttttcagaag
tacagccacatggaccaaagtctctttacaagatttgttcgtcttggtgtcccttacatt
gagctcaatgctcaggggcgtgccagacctagcatcgccgaactatataactggagatac
agagaacttggagatctaccttacgtccgtgaggaggctatcttccacaaagctaattct
ggcttctcttatgactatcagttggttgatgttcctgatttccgtggcagaggtgagtct
gccccttctccttggttctaccagaatgaaggggaggctgagtttatagttagtgtctac
atctacatgcgcctgattggataccctgccaataagatttcgatattgaccacttacaat
ggtcagaagcttcttattcgcgatgttattaacagaagatgcaagccatggaatatcgaa
ccacctagcaaggttaccacagtggacaagttccagggtcaacaaaatgatttcatttta
ttatctcttgtccgcacccgttttgtggggcatcttcgtgatgtcagaagacttattgtg
gcaatgtcccgtgctcgtctgggcctgtatgtgttctgccgtcgttcactttttgaacag
tgctacgaattgcagccaacattccagcttctcctccagaggcctgataagcttggcttg
aatcttgaagagtgcacaccatttacagagcgacctttagaggaaactggaaatattcat
tatgttgctggtattgaagatattggtcatctagtgaatttcagattagaacatcttcgt
cagatgcaatacatgcaatattatgcacctcatgcaaatgtaccaccttcagcagtacca
gaaaacaatgctgatgcaactgaaaatggcaatgctggcaatggtatgcataaggcaaac
gatgtcatggctgaagaaaatggtgatgcagtgatgagaaataagatggaggaagacact
attgatacaatgcaggaagaaaacaagatggatggtaaaaatcctgaggcaaacgacatg
gctatggaggagaagaccgtcgacggagatgatgatccaaagaataagatggaggaagga
aatactgaggcaaagaataagatggaggaaggaaatactgaggcaaaggacaagatggag
gaagaaaatgatgtggcaaagaacaatatggaagagtga
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integrated database retrieval system
