Oryza sativa japonica (Japanese rice): 4333005
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Entry
4333005 CDS
T01015
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X3
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4333005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4333005
Spliceosome [BR:
osa03041
]
Common components
Common spliceosomal components
SR proteins
4333005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
YflT
RRM_5
Motif
Other DBs
NCBI-GeneID:
4333005
NCBI-ProteinID:
XP_015629144
UniProt:
Q10KD9
LinkDB
All DBs
Position
3:complement(join(15828048..15828096,15828229..15828426,15829014..15829085,15829828..15829894,15830006..15830085,15830193..15830271,15830372..15830447))
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AA seq
206 aa
AA seq
DB search
MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSP
SPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSIS
PDYDRRHRKNGRPRDERSPRSRSPLT
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcctcggccgctacggcccaccggcggtccgcgactcctactccctcctcgtc
ctcaacgtctccttccgcacgacggccgacgacctcctcgcgctcttcgaccgctgcggc
gaggtcctcgacatccgcatcccccgcgaccgcaggactggggattcgagagggttcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagaaggccgtcgataagctcgacgggagg
acggtggatgggagggatatcatggtgcagttcgccaagtacggcccaaatgctgaaaga
attcataaggggaggattgtagaagagatttcgaagccaagaggccgatccagaagtcct
agtccaaaacggaggtatcgtgctgactaccgagacaggggctaccgtgatgactatcgg
gacagacactatcgtgatgactatcaggacagggagtataggagaagccgaagcatagag
aggtatgaacgtgagaggtatcaagaaaaaggctatcgtcgcaggagccggagcattagc
cctgattatgacaggaggcatcgcaagaatggcaggcccagggatgaacgttctccacgc
tctcgaagccctttgacctag
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