KEGG   Oryza sativa japonica (Japanese rice): 4333120
Entry
4333120           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4333120
Membrane trafficking [BR:osa04131]
 Protein recycling
  Others
   EARP complex
    4333120
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    4333120
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC Cep57_MT_bd
Other DBs
NCBI-GeneID: 4333120
NCBI-ProteinID: XP_015632567
UniProt: Q7Y1L1 Q0DR52
LinkDB
Position
3:complement(join(17832510..17832811,17832892..17832949,17833412..17833486,17833578..17833712,17833834..17834013,17834163..17834213,17834385..17834485,17835410..17835468,17835549..17835664,17836516..17836701,17837288..17837369,17838069..17838160,17839001..17839144,17839904..17839984,17840663..17840746,17841313..17841414,17841770..17841865,17842087..17842147,17842266..17842369))
AA seq 702 aa
MDAAPAAAEAHDGQRERFDLGVLVGDLALDEDVASDEDESLEGLRQELDDCKDDEEVANI
LANGIKLRDYTKGVENNIRQIELDSIQDYIGESENLVSLHDQIRDCDNILSQMETVLTGF
QTEIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVEDIIVPPRMIDIIVDGEVNDE
YMKTLETLSRKIKFIEVDAMVKSSKALKDVQPEVERLRQKAVSKIFEFVIQKFYALRKPK
TNIQILQQSVLLKYKYTIVFLKEHAKEIYAEVRAAYIDTMNKVLSAHFRAYIQALEKLQL
DIATSTDLLGVETRSTGFLFSMGKESLKTRSSVFALGERINILKEIDQPALIPHIAEAKS
QKYPYEVLFRSLQKLLIDTATSEYLFSDDFFGEESLFNDIFAGPIQVVDEHFNAVLLNCY
DAIGIMLMIRIIHQHQLIMFKRRIPCLDSYLDKVNLSLWPRFKMVFDLHLNSLRNANVKT
LWEDDVHPHYVMRRYAEFTASLVHLNVEYGDGQLDLNLERLRMAVEELLVKLAKMFPKQK
LQTVFLINNYDLTISILKEAGTEGGKAQVHFEEVLKSNISVYVEELLLEHFSDLIKFVKS
RPSEDTASSSDKASVSDVEPLVKDFAGRWKAAIELMHKDVITSFSNFLCGMEILKAALTQ
LLLYYTRITECVKKINGGSALNKDLVSISSILYEIKKYSRTF
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggacgctgcccccgccgccgccgaggcgcacgacgggcagagggagcggttcgacctc
ggggtgttggtcggcgacctcgccctcgacgaggatgtcgccagtgatgaggacgagtcg
ctggaggggttgaggcaggagctcgacgactgcaaggacgacgaggaagtggcaaatatc
ctggctaacggcatcaaactgcgtgattacacaaaaggcgtcgagaacaacattcgccaa
attgagctggattctatacaggattacattggagaaagtgaaaacttggtatcgctgcat
gatcagattcgtgactgtgataacattttgtcacaaatggaaactgttctgactggattc
cagacagaaattggttctataagttcggagataaaggtccttcaggagaaatctatggac
atgggattaaagttgaaaaatcgtaaggctgcagagtctaaattgtcaaaatttgttgag
gatataatagtgcctccaagaatgattgacataattgtcgatggagaggttaatgacgaa
tacatgaaaacacttgagactctaagcagaaaaatcaagttcattgaagttgatgcaatg
gttaaatcgtccaaggctctaaaggatgttcaacctgaggttgagagacttaggcagaaa
gcagtctcaaagatttttgaatttgtcatccaaaagttctatgccttgagaaaaccgaaa
acaaatattcagattctacagcagagtgttcttcttaaatacaagtacacgatagttttt
cttaaggaacatgctaaggagatatatgcggaagttcgtgcagcttatattgataccatg
aacaaggtgctgagtgcacatttccgtgcgtatattcaagcattagagaaactacaactg
gacatagcaacctctaccgacttacttggagttgaaactagaagtacaggattccttttc
tccatgggaaaagaatctctgaagacccgttcttctgtctttgctttgggtgaaaggata
aacatattaaaggaaattgatcagcctgccttgatacctcacatagctgaagccaagtct
caaaaatatccatatgaagttcttttcagaagcttgcaaaaacttttgattgatacagct
acttcagagtaccttttctctgatgatttctttggtgaagaatcactgtttaatgacata
tttgcaggacctatccaagttgttgatgaacatttcaatgctgtgctcctgaactgttat
gacgcaatcggcataatgcttatgatccgaataattcatcagcatcagctaatcatgttt
aagcggcgaatcccatgtttggactcttacttagacaaggttaacttatcactctggcct
cgcttcaagatggtgtttgatttgcatttgaacagcttacgaaatgcaaatgttaagact
ctttgggaggatgatgttcatcctcactatgtcatgaggagatatgctgaatttacagca
tccctcgtgcatctcaatgttgaatatggagatggtcagcttgatcttaatctcgagcgg
ttgcggatggctgttgaggaattgcttgttaagttggctaagatgttccctaaacaaaag
ttgcaaactgttttcctgataaacaactatgatttaacgatttccatactgaaggaagct
ggcactgagggtggaaaagcacaagttcactttgaggaggttcttaagagcaatatttca
gtatatgtggaggaacttctactggagcatttcagtgatttgatcaaatttgtgaaatct
cgcccgtctgaagacacagcatcaagctcggacaaggccagtgttagtgatgtcgagcca
ttagtcaaggattttgccggtcggtggaaagctgcaattgagcttatgcacaaggatgtc
attacatcttttagcaacttcctctgcggaatggagatcctgaaagcggcactcacgcag
ctgctgctgtactatacaaggatcaccgagtgtgtcaagaagatcaatggtggctctgct
ctcaacaaggacctggtttccatatcctctatcttatatgagatcaagaaatactccagg
accttttag

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