Oryza sativa japonica (Japanese rice): 4333131
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Entry
4333131 CDS
T01015
Name
(RefSeq) erlin-2-B
KO
K23341
erlin
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4333131
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
ERAD complex
4333131
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GFIT
Motif
Pfam:
Band_7
Tap-RNA_bind
Motif
Other DBs
NCBI-GeneID:
4333131
NCBI-ProteinID:
NP_001415161
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All DBs
Position
3:complement(join(18007471..18007551,18007635..18007743,18007840..18008054,18008651..18008797,18008915..18009073,18009558..18009617,18009786..18009853,18009934..18010036,18011989..18012171))
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AA seq
374 aa
AA seq
DB search
MSDGSVESPSLHRTPPPPSPSPSLSLSRSQQQTPRGRQPPPPGADPVAFAVVAFVAICFV
LISFSAPSSILHQVPEGHVGVYWRGGALLETITPPGFHVKLPWITQFEPIQVTLQTDQVR
NIPCGTKGGVMISFDKIEVVNRLHKEFVHETLLNYGVHYDKTWIYDKIHHEINQFCSAHS
LQQVYIDLFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPDSIRRNFELMEEERTK
ALIAIEKQKVAEKEAETQKKIALSEAEKNAQVSKILMEQKLMEKDSSKRQQQIDNEMFLA
REKALTDANYYRITKEAEANRLKLTPEYLELRFIESIANNSKIFFGEKIPNMIMDQRMLR
NYLDNGSTKDHLEI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggcagcgtcgagtcgccgtcgctccaccgcacgccgcctccgccctccccg
tcgccgtcactctcgctctcgcgctcccagcagcagaccccgcggggccgccagccgccc
ccgcccggcgccgaccccgtcgccttcgccgtcgtcgccttcgtcgccatctgcttcgtg
ctgatttcattttcggcaccgtcaagcattctacatcaagtccctgaaggacatgttggg
gtgtactggagaggaggtgctcttttggaaacaatcactccaccaggttttcatgtgaag
ctgccttggataacccaatttgagccaatacaggttactcttcaaacagaccaggtcaga
aatattccttgtggaacaaaaggtggagtcatgatcagctttgataagatcgaggttgtc
aaccgcctccataaagagtttgtgcacgaaaccttactcaattatggtgtgcattatgac
aagacatggatctatgacaaaattcatcatgagataaaccagttctgtagtgcccacagt
ttgcagcaagtttacatcgacttgtttgatcagattgatgaaacgatgaaagaagctatt
caaagagactgtacacgctatgctcctggtattgagataatcagtgttcgtgttacaaag
ccgaacatacctgatagcattaggagaaattttgaacttatggaggaggagcgtacaaag
gcattgattgccattgagaagcaaaaggtagcagagaaggaagcagaaacgcagaagaaa
attgcactatctgaagcagagaagaatgcacaggtgagcaagatcctcatggagcagaag
cttatggaaaaggacagctccaagaggcagcaacagattgataatgaaatgttccttgcc
cgagagaaagctcttacagatgcgaactattacaggataacgaaggaagcagaggccaac
aggcttaaacttacaccggagtaccttgagctgaggttcattgaatcaatcgccaataac
tcgaagatattctttggtgaaaagattccaaacatgatcatggatcaaaggatgcttagg
aattacctcgacaatggttccaccaaggaccatttggaaatatag
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