Oryza sativa japonica (Japanese rice) (RefSeq): 4333165
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Entry
4333165 CDS
T01015
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4333165
04120 Ubiquitin mediated proteolysis
4333165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4333165
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4333165
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
U-box type E3
4333165
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
4333165
NCBI-ProteinID:
XP_015631507
UniProt:
Q75I67
A0A0P0VZW9
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All DBs
Position
3:17884897..17892015
Genome browser
AA seq
1036 aa
AA seq
DB search
MASPSPAARPQRTPDEVEDIITRKILLVSLTPPSTPNPAVAYLELTAAELLSESRPLLAL
RDASERLLIDRLSLPDQPAGSPSPFAYLVSSFRRAADEARKISTIRDAALRARLAASIAH
LRGLILSYARIVAGNPDTFPSPHNAPHPAAELLVFHLAEAADPLDPTPAPGAPPPPGFLD
EFFANADYETVEPAMGELYGRLRQSVEKVSALGDFQKPLRVLRRLVGIPNCAKALVNHPR
WIPKNQIMLIGEGRIMEISSVLGAFFHVSAIPDREFASKPDIGQHCFSEASSRRPADLMS
SFTTIKSVMNNLYDGLKDVLLALLKNMDTREKVLEFIAEVINKNAGRSRMQVDPLKSASS
GMFVNLSAVMLRLCEPFLDRMESKKDKIDVNYLFCNDRIDFKNLTAINASSEEVSSWIEN
RGYEHAEDSASGEARFVESQEATSSGNNSTVSLSSKGGSLVNCSKKENFSFICECFFMTA
RVLNLGLMKALSDFKHIAQDLARCQDDLDSNRAMRDQGGGSAQLDQDIKRLEKIVEILSQ
DKLCYEAQIIRDGAFLQRALSFYRLMILWSVDLVGGFKMPLPSQCPKEFACIPEHFLDDA
MDLLVLTSRIPKALESFALDDFLNFIIMFMAGTSYIKNPYLRAKMVEVLNCWMPQRSGLS
STASLFEGHQLCLDYLVKNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPSHR
NAWRRIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANVVEWESRPPQE
REERLRVFHQWENVVRFDMKLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQL
AGPQRKSLTVKDPEKYEFKPKQLLKQIATIYVHITRGDKEGIFPAAISKDGRSYNEQLFA
SAANILWKIGGDPQIIQEFMQLASKSKTAASEAMDAEAMLGDIPDEFLDPIQYTLMKDPV
ILPSSRVTIDRPVIVRHLLSDSTDPFNRSHLTQDMLIPDTELKSRIEEFIRSQRSKKRTA
ADSEMGEPDGAADMAD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccgtccccggcggcgcggccgcagcggacgcccgacgaggtggaggacatc
atcacgcgcaagatcctcctcgtctccctcaccccgccctccacgcccaacccggccgtc
gcctacctcgagctcaccgccgccgagctcctctccgagtcgcgcccgctcctcgccctc
cgcgacgcctccgagcgcctcctcatcgaccgcctctccctcccggaccagcccgccggg
tccccctcccccttcgcctacctcgtctcctccttccgccgcgccgccgacgaggcccgc
aagatctccaccatccgcgacgccgccctccgcgcgcgcctcgccgcctccatcgcgcac
ctccgcggcctcatcctctcctacgcccgcatcgtcgccgggaaccccgacaccttccct
tcgccgcacaacgcgccccaccccgccgccgagctgctcgtcttccacctggccgaggcc
gccgacccgctcgaccctaccccggcccctggtgccccgccgccgccggggttcctcgac
gaattcttcgccaacgccgattacgagaccgtcgagccggccatgggcgagctctacggc
cgcctcaggcaaagcgtcgagaaggtgtcggcgcttggcgacttccagaagccgctgcgg
gtgctcaggcggctggtgggaatccctaactgcgcaaaggctctggtgaatcaccccagg
tggataccgaagaatcaaattatgctcattggggaagggagaatcatggagatctccagt
gtgctcggggcgttcttccatgtcagtgcgatccctgaccgcgagtttgcaagcaagcct
gatattgggcaacattgcttctcagaggcatcttcacgcagaccagctgatttgatgtca
tcttttacaacaatcaaaagcgttatgaataacttgtatgatggccttaaggatgttctt
cttgcgctgctaaaaaatatggatactcgagaaaaggttctcgagtttattgctgaagtg
ataaataaaaatgcaggcagatctcgtatgcaggtagaccctttaaagagtgccagctca
ggtatgtttgtgaatctcagtgccgtgatgctacgtctatgtgagccttttctggatagg
atggagtctaagaaggacaagattgatgtcaattacctcttctgcaacgatagaattgat
ttcaagaatttgactgcaataaatgcttcttccgaggaagtatcatcttggatagagaac
aggggctatgagcatgctgaagatagtgccagtggagaggctcgctttgttgaatcacaa
gaagcgacaagctctggcaacaatagcacagtttctctttcttctaaaggcgggtcactt
gtgaattgctcaaagaaagagaatttctcatttatttgtgaatgcttcttcatgactgca
agggtgctcaatctggggctgatgaaagctctatcggatttcaaacatattgctcaggat
ctcgcaaggtgccaagatgacttggattcaaacagagcaatgagagatcaaggaggtggt
tcagcacagcttgatcaagatataaaacgcttagagaagatagttgagattttatcacag
gacaaactctgttatgaagctcagataattagggatggtgcatttcttcaacgtgcacta
tctttctacagattaatgatactatggtcagtagaccttgttggcggatttaagatgcct
ttgccatcacaatgtccaaaggaatttgcttgcattccagagcatttcctcgatgatgca
atggatttactagttctaacctctagaattccaaaagctttggaaagctttgcgttggat
gactttctcaacttcatcattatgttcatggcgggcacttcatacattaaaaatccttac
cttagagcaaagatggttgaagttttgaattgctggatgccacaaagaagtgggttgagt
tctacagcctcattatttgaggggcaccaactatgtctcgattacctggtcaaaaatctt
ctaaagctttatgtggatattgaattcactggttcccatacacaattctttgacaagttt
aacattcgacataatattgctgagcttctagagtatctatgggatgtccccagtcatcgg
aatgcatggagacgaatagctaaagaggaggagaagggcgtatatttaaattttttgaac
ttccttatcaatgatagcatctatcttcttgatgagagtttgaacaaaatcctcgaactg
aaagaaatagaggctgaaatggctaatgttgtagagtgggaaagcaggccacctcaagaa
agagaggagagattgcgtgtatttcatcagtgggagaatgttgttcgatttgacatgaag
ctagcaaatgaggatgttgggatgcttgctttcacgtcagagcagattccagcacctttc
ctccttcctgaaatggtggaaagggtggcaagcatgctaaattacttcctcttgcaactt
gctggtcctcagaggaaatcattgactgtaaaagatcctgaaaagtatgagttcaagccg
aagcagctcttgaaacagattgccaccatctatgtccatatcacaaggggtgataaagaa
ggtatattcccagcagccatctcaaaagatggaagatcatacaatgagcagttgtttgca
agtgcagcaaatattttgtggaagattgggggagacccccaaatcatacaggagtttatg
caacttgccagtaagtcaaaaactgctgcttctgaggcaatggatgctgaggctatgctt
ggtgacataccagatgaatttcttgatccaattcagtatactctgatgaaggatcctgta
atactaccatcatcacgggtgacaatagatcgtcccgttattgttaggcacttgctaagt
gacagtactgatccgttcaaccgttctcaccttacgcaagacatgttgataccggataca
gagctcaagtcgcgcatcgaagagtttatcaggtctcaacggtccaaaaaacgaactgct
gccgattcagaaatgggagaacctgatggggctgctgatatggctgattga
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