KEGG   Oryza sativa japonica (Japanese rice): 4333165
Entry
4333165           CDS       T01015                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4333165
   04120 Ubiquitin mediated proteolysis
    4333165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4333165
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4333165
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  U-box type E3
   4333165
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 4333165
NCBI-ProteinID: XP_015631507
UniProt: Q75I67 A0A0P0VZW9
LinkDB
Position
3:join(18341179..18342026,18342667..18342871,18343387..18343538,18343645..18343936,18344146..18344301,18344900..18345103,18345214..18345326,18345417..18345531,18345632..18345721,18345802..18346005,18346103..18346198,18346433..18346555,18346647..18346739,18346816..18346980,18347518..18347607,18347695..18347859)
AA seq 1036 aa
MASPSPAARPQRTPDEVEDIITRKILLVSLTPPSTPNPAVAYLELTAAELLSESRPLLAL
RDASERLLIDRLSLPDQPAGSPSPFAYLVSSFRRAADEARKISTIRDAALRARLAASIAH
LRGLILSYARIVAGNPDTFPSPHNAPHPAAELLVFHLAEAADPLDPTPAPGAPPPPGFLD
EFFANADYETVEPAMGELYGRLRQSVEKVSALGDFQKPLRVLRRLVGIPNCAKALVNHPR
WIPKNQIMLIGEGRIMEISSVLGAFFHVSAIPDREFASKPDIGQHCFSEASSRRPADLMS
SFTTIKSVMNNLYDGLKDVLLALLKNMDTREKVLEFIAEVINKNAGRSRMQVDPLKSASS
GMFVNLSAVMLRLCEPFLDRMESKKDKIDVNYLFCNDRIDFKNLTAINASSEEVSSWIEN
RGYEHAEDSASGEARFVESQEATSSGNNSTVSLSSKGGSLVNCSKKENFSFICECFFMTA
RVLNLGLMKALSDFKHIAQDLARCQDDLDSNRAMRDQGGGSAQLDQDIKRLEKIVEILSQ
DKLCYEAQIIRDGAFLQRALSFYRLMILWSVDLVGGFKMPLPSQCPKEFACIPEHFLDDA
MDLLVLTSRIPKALESFALDDFLNFIIMFMAGTSYIKNPYLRAKMVEVLNCWMPQRSGLS
STASLFEGHQLCLDYLVKNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPSHR
NAWRRIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANVVEWESRPPQE
REERLRVFHQWENVVRFDMKLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQL
AGPQRKSLTVKDPEKYEFKPKQLLKQIATIYVHITRGDKEGIFPAAISKDGRSYNEQLFA
SAANILWKIGGDPQIIQEFMQLASKSKTAASEAMDAEAMLGDIPDEFLDPIQYTLMKDPV
ILPSSRVTIDRPVIVRHLLSDSTDPFNRSHLTQDMLIPDTELKSRIEEFIRSQRSKKRTA
ADSEMGEPDGAADMAD
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggcgtccccgtccccggcggcgcggccgcagcggacgcccgacgaggtggaggacatc
atcacgcgcaagatcctcctcgtctccctcaccccgccctccacgcccaacccggccgtc
gcctacctcgagctcaccgccgccgagctcctctccgagtcgcgcccgctcctcgccctc
cgcgacgcctccgagcgcctcctcatcgaccgcctctccctcccggaccagcccgccggg
tccccctcccccttcgcctacctcgtctcctccttccgccgcgccgccgacgaggcccgc
aagatctccaccatccgcgacgccgccctccgcgcgcgcctcgccgcctccatcgcgcac
ctccgcggcctcatcctctcctacgcccgcatcgtcgccgggaaccccgacaccttccct
tcgccgcacaacgcgccccaccccgccgccgagctgctcgtcttccacctggccgaggcc
gccgacccgctcgaccctaccccggcccctggtgccccgccgccgccggggttcctcgac
gaattcttcgccaacgccgattacgagaccgtcgagccggccatgggcgagctctacggc
cgcctcaggcaaagcgtcgagaaggtgtcggcgcttggcgacttccagaagccgctgcgg
gtgctcaggcggctggtgggaatccctaactgcgcaaaggctctggtgaatcaccccagg
tggataccgaagaatcaaattatgctcattggggaagggagaatcatggagatctccagt
gtgctcggggcgttcttccatgtcagtgcgatccctgaccgcgagtttgcaagcaagcct
gatattgggcaacattgcttctcagaggcatcttcacgcagaccagctgatttgatgtca
tcttttacaacaatcaaaagcgttatgaataacttgtatgatggccttaaggatgttctt
cttgcgctgctaaaaaatatggatactcgagaaaaggttctcgagtttattgctgaagtg
ataaataaaaatgcaggcagatctcgtatgcaggtagaccctttaaagagtgccagctca
ggtatgtttgtgaatctcagtgccgtgatgctacgtctatgtgagccttttctggatagg
atggagtctaagaaggacaagattgatgtcaattacctcttctgcaacgatagaattgat
ttcaagaatttgactgcaataaatgcttcttccgaggaagtatcatcttggatagagaac
aggggctatgagcatgctgaagatagtgccagtggagaggctcgctttgttgaatcacaa
gaagcgacaagctctggcaacaatagcacagtttctctttcttctaaaggcgggtcactt
gtgaattgctcaaagaaagagaatttctcatttatttgtgaatgcttcttcatgactgca
agggtgctcaatctggggctgatgaaagctctatcggatttcaaacatattgctcaggat
ctcgcaaggtgccaagatgacttggattcaaacagagcaatgagagatcaaggaggtggt
tcagcacagcttgatcaagatataaaacgcttagagaagatagttgagattttatcacag
gacaaactctgttatgaagctcagataattagggatggtgcatttcttcaacgtgcacta
tctttctacagattaatgatactatggtcagtagaccttgttggcggatttaagatgcct
ttgccatcacaatgtccaaaggaatttgcttgcattccagagcatttcctcgatgatgca
atggatttactagttctaacctctagaattccaaaagctttggaaagctttgcgttggat
gactttctcaacttcatcattatgttcatggcgggcacttcatacattaaaaatccttac
cttagagcaaagatggttgaagttttgaattgctggatgccacaaagaagtgggttgagt
tctacagcctcattatttgaggggcaccaactatgtctcgattacctggtcaaaaatctt
ctaaagctttatgtggatattgaattcactggttcccatacacaattctttgacaagttt
aacattcgacataatattgctgagcttctagagtatctatgggatgtccccagtcatcgg
aatgcatggagacgaatagctaaagaggaggagaagggcgtatatttaaattttttgaac
ttccttatcaatgatagcatctatcttcttgatgagagtttgaacaaaatcctcgaactg
aaagaaatagaggctgaaatggctaatgttgtagagtgggaaagcaggccacctcaagaa
agagaggagagattgcgtgtatttcatcagtgggagaatgttgttcgatttgacatgaag
ctagcaaatgaggatgttgggatgcttgctttcacgtcagagcagattccagcacctttc
ctccttcctgaaatggtggaaagggtggcaagcatgctaaattacttcctcttgcaactt
gctggtcctcagaggaaatcattgactgtaaaagatcctgaaaagtatgagttcaagccg
aagcagctcttgaaacagattgccaccatctatgtccatatcacaaggggtgataaagaa
ggtatattcccagcagccatctcaaaagatggaagatcatacaatgagcagttgtttgca
agtgcagcaaatattttgtggaagattgggggagacccccaaatcatacaggagtttatg
caacttgccagtaagtcaaaaactgctgcttctgaggcaatggatgctgaggctatgctt
ggtgacataccagatgaatttcttgatccaattcagtatactctgatgaaggatcctgta
atactaccatcatcacgggtgacaatagatcgtcccgttattgttaggcacttgctaagt
gacagtactgatccgttcaaccgttctcaccttacgcaagacatgttgataccggataca
gagctcaagtcgcgcatcgaagagtttatcaggtctcaacggtccaaaaaacgaactgct
gccgattcagaaatgggagaacctgatggggctgctgatatggctgattga

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