Oryza sativa japonica (Japanese rice): 4333290
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Entry
4333290 CDS
T01015
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1 isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4333290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4333290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4333290
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
4333290
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4333290
Exosomal proteins of colorectal cancer cells
4333290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
APG6_N
CDT1
TBPIP
MRB1590_C
TMF_TATA_bd
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
4333290
NCBI-ProteinID:
XP_015628046
UniProt:
Q10HX5
A0A5S6R6T6
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All DBs
Position
3:complement(join(21699986..21700146,21700497..21700617,21700811..21700857,21700995..21701034,21701444..21701531,21702062..21702277,21702702..21702727))
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AA seq
232 aa
AA seq
DB search
MSWRFPLFGSSQQQQPDTNFQDNPTQPWYPPSVLGSSSHPSLPSSSSGSPHQRASDNPQS
LHGQPSPAEAAGIIARLKDKSVDDLQRLLKDKEAYSAFFNSLDQVKTQNNLRDELKKETV
QLARDNLEKEQRISEIRNQCTIIRTTELAAAQDRLADLERQRDEVMKSYSPAALLDKLQK
LMAKLDEESEELHQKFLEKDIDLPTFVQKHKKLRTAYHKQALLHLAGKTSVR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagatttcctcttttcggcagctcgcagcagcagcaacctgatacaaatttc
caggacaaccctacacaaccatggtaccctccgtctgtccttggttcatcttcacatcca
tccctgcccagctcgtccagtggtagtccacatcaaagagcttctgataatccccaatca
ttgcatggtcagccatctccagctgaggctgcagggataattgctcgcttaaaggacaaa
agtgttgatgacttgcagagactgttgaaagacaaagaggcatacagtgctttcttcaat
tcactcgatcaagttaaaacccagaacaatttgcgggatgagcttaaaaaggagacagtg
caacttgcaagggataatttggaaaaggaacagcggatctcggagattaggaatcagtgc
actattataagaactacagaactagctgctgctcaggataggttggctgatttagaaagg
caaagggatgaggttatgaagtcgtattcccctgctgcactgctcgacaagctccaaaaa
ttgatggcgaagttagatgaggagtctgaggagctgcatcagaagttcctggagaaggac
attgacctccctacctttgtgcagaagcacaagaagctccgaactgcctaccacaagcag
gcattgctccatctcgccggcaagacctcggttcgctga
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