Oryza sativa japonica (Japanese rice): 4333306
Help
Entry
4333306 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein eL13y
KO
K02873
large subunit ribosomal protein L13e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4333306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4333306
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4333306
Archaea
4333306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L13e
NQRA
Motif
Other DBs
NCBI-GeneID:
4333306
NCBI-ProteinID:
XP_015632652
UniProt:
A3AJT4
Q7XJB4
LinkDB
All DBs
Position
3:complement(join(21944503..21944727,21944817..21944975,21945287..21945420,21945954..21946062))
Genome browser
AA seq
208 aa
AA seq
DB search
MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQKKAVKIFPRPTSGPLRPIVQC
QTLKYNMKSRAGRGFTLEELKAAGIPKKYAPTIGISVDHRRKNRSLEGLQANVQRLKTYK
AKLVIFPRRARKVKAGDSTAEELATATQVQGDYMPIARGEKRSVEVVKVTDEMKAFKAYA
KLRVERMNQRHVGARQKRAAEAEKEEKK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcacaacaacgttatccccaatggccacttcaagaagcactggcagaactat
gtcaagacatggttcaaccagcccgcccgcaagcagaggcgccgcattgctcgccagaag
aaggctgtgaagatcttcccccgcccaacatctggccctcttcgacccattgttcagtgc
caaactttgaagtacaacatgaagtcgagggctgggagaggctttacccttgaggagctg
aaggctgcgggcatccccaagaagtatgctccaaccattggaatttccgtggatcaccgc
cgcaagaaccgctcacttgagggactccaggctaatgtccagaggctcaagacatacaag
gccaagctggttatcttcccaaggcgtgctcgcaaggtcaaggctggtgattccactgcc
gaggaacttgccactgccacccaggtccagggtgactacatgcctattgctcgtggtgag
aagcgctcagttgaggttgtgaaggtcaccgatgagatgaaggcgttcaaggcctatgct
aagctccgtgttgagaggatgaaccagcgccatgttggtgcccgccagaagagggctgct
gaggcagagaaggaagagaagaagtga
Oryza sativa japonica (Japanese rice): 4339923
Help
Entry
4339923 CDS
T01015
Name
(RefSeq) 60S ribosomal protein L13-1
KO
K02873
large subunit ribosomal protein L13e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4339923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4339923
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4339923
Archaea
4339923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L13e
NQRA
3-HAO
Motif
Other DBs
NCBI-GeneID:
4339923
NCBI-ProteinID:
NP_001407930
LinkDB
All DBs
Position
6:complement(join(1024081..1024305,1024388..1024546,1024668..1024801,1025578..1025686))
Genome browser
AA seq
208 aa
AA seq
DB search
MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQKKAVKIFPRPTSGPLRPIVQC
QTLKYNMKSRAGRGFTLEELKAAGIPKKFAPTIGISVDHRRKNRSLEGLQANVQRLKTYK
AKLVIFPRRARKVKAGDSTPEELATATQVQGDYMPITRGEKRSVEVVKVTDDMKAFKAYA
KLRVERMNQRHIGARQKRAAEAEKEEKK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcacaacaacgtcatcccgaatgggcacttcaagaagcactggcagaactat
gtcaagacatggttcaaccagcccgcccgcaagcagaggcgccgcatcgctaggcaaaag
aaagctgtgaagatcttcccccgccctacttctggaccacttcgccccattgttcagtgc
caaacacttaagtacaacatgaagtctagggctggaaggggcttcacccttgaagagctg
aaggcagctgggatccccaagaagtttgccccaaccattggcatctcagtggatcaccgc
cgtaagaaccgctcacttgaaggtctgcaggccaatgtccagaggctgaagacctacaag
gccaagcttgtcatcttcccaagacgtgcccgcaaggtcaaggctggtgactcgactcct
gaggagcttgccacagccacccaggtccagggtgactacatgcctatcacccgtggcgag
aagcgctcggttgaggtcgtgaaggtcacggatgacatgaaggcattcaaggcctacgcc
aagctgcgcgtggagaggatgaaccagcgccacatcggtgcccggcagaagagggcggcc
gaggctgagaaggaagagaagaagtga
DBGET
integrated database retrieval system
