Oryza sativa japonica (Japanese rice): 4333569
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Entry
4333569 CDS
T01015
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 6
KO
K05391
cyclic nucleotide gated channel, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
4333569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
osa04040
]
4333569
Ion channels [BR:
osa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
4333569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
4333569
NCBI-ProteinID:
XP_015631537
UniProt:
A0A8J8YPJ4
Q10G24
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All DBs
Position
3:join(25868359..25869162,25869805..25870109,25870905..25871931)
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AA seq
711 aa
AA seq
DB search
MSYASGGGGGGELATKRSAFHIDYGGGVSLRRLAQPEALARGMITQGSAQLRTLGRSLRT
GAAMAVVFQEDLKNTSRKIFDPQDRLLVRLNRSFVVSCIVSIAVDPVFFYAPQVTANGGN
LCVGISRDLAISASVVRTVVDLFFAARIVLQFRTAYIAPSSRVFGRGELVIDTAQIAARY
FRRFFAADLLSVLPLPQIVIWKFLHRSKGAAVLSTKDALLIIVFLQYIPRVVRIYPLSSE
LKRTSGAFAESAYAGAAYYLLWYMLASHIVGASWYLLSIERVSDCWKKACNEFPGCNKIY
MYCGNDHQKGFLEWRTITRQYINETCEPRDGVMPFNYGIYTPAVRSDVIKSNDFTSKLLY
CLWWGLANLSTLGQGLQTSIYTGEALFSIFLATFGLILMAMLIGNIQTYLQSMTVRLEEM
RVKRRDSEQWMHHRLLPQELRERVRRYDAYKWVNTRGVDEEVLVANLPKDLRRDIKRHLC
LGLVRRVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLESITTD
GGRSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPSSTRTVRALSEVEAFALHSDELKF
VAGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHLKRRAAELRRREEEEEEAAAI
RSSTGLKTTMLVSRFAANAMRGVHRQRSRRADEVLMMPMPKPSEPDFGADY
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgcgtccggtggcggcggcggcggggagctggcgacgaagcggtcggcgttc
cacatcgactatgggggtggcgtgtcactgcggcggctggcgcagccggaggccctggcg
cgcgggatgatcacgcaggggtcggcgcagctgcggacgctggggcggtcgctgcggacg
ggggcggccatggcggtggtgttccaggaggacctgaagaacacctcccgcaagatcttc
gacccgcaggaccggctgctggtgcgcctgaaccgcagcttcgtggtctcctgcatcgtc
tccatcgccgtcgacccggtgttcttctacgcgccccaggtgacggcgaacggcggcaac
ctgtgcgtggggatcagccgcgacctggccatctccgccagcgtcgtgcgcaccgtcgtg
gacctcttcttcgcggcgcggatcgtgctccagttccggaccgcttacatcgctccgtcg
tcccgcgtattcggccgcggcgagctcgtcatcgacaccgcccagatcgccgcccggtac
ttccggcggttcttcgccgccgacctcctctccgtgctcccgctcccgcagatcgtgatc
tggaagttcctccaccggtccaagggcgccgccgtgctgtccaccaaggacgcgctcctc
atcatcgtcttcctccagtacatcccccgcgtcgtccgcatctaccctctctcctccgag
ctcaagcgcaccagcggcgccttcgccgagtccgcctacgccggcgccgcctactacctc
ctctggtacatgctcgccagccacatcgtgggggcatcgtggtacttgctgtcgatcgag
agggtgagcgattgctggaagaaggcgtgcaacgagttcccgggatgcaacaagatctac
atgtactgcggcaacgaccaccaaaaagggttcctcgagtggcgaaccatcacgcggcag
tacatcaacgagacgtgcgagcctagggacggcgtcatgcccttcaactacggcatctac
acgccggccgtcaggtccgacgtcatcaagtccaacgacttcacctccaagctcctctac
tgcctctggtggggccttgccaacctcagcacgctggggcaagggctgcagacgagcata
tacacgggggaggcgctgttctcgatattcctggcgacgttcgggctgatcctgatggcg
atgctgatcggcaacatccagacgtacctgcagtcgatgacggtgaggctggaggagatg
cgggtgaagcggcgcgactcggagcagtggatgcaccaccgcctcctcccccaggagctc
cgggagcgcgtccgccgctacgacgcctacaagtgggtcaacacccggggcgtcgacgag
gaggtcctcgtcgccaacctccccaaggacctccgccgcgacatcaagcgccacctctgc
ctcggcctcgtccgccgcgtcccgctcttcgccaacatggacgagcgcctcctcgacgcc
atctgcgagcgcctccgccccgccctctacaccgagcgcaccttcatcatccgcgagggc
gaccccgtcgaccagatgctcttcatcatccgcggctgcctcgagagcatcaccaccgac
ggcggccgctccggcttcttcaaccgcagcctcctcgaggagagcgacttctgcggcgag
gagctcctcacctgggcgctcgaccccaaggccggcctctccctcccctcctccacccgc
accgtcagggccctctccgaggtcgaggccttcgccctccactccgacgagctcaagttc
gtggcggggcagttccgccggatgcacagcaagcaggtgcagcacaccttccggttctac
tcccagcagtggcggacgtgggcggccacctacatccaggccgcctggaggcgccacctc
aagcggagggcggcggagctgcggcggagggaggaggaggaggaggaggccgccgcgatc
cgctcgtcgacggggctcaagaccaccatgctggtgtcgcgcttcgccgccaacgccatg
cgcggcgtccaccggcagcgatccaggcgggccgacgaggtcctcatgatgcccatgccc
aagccctccgagcctgatttcggcgccgattactga
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