Oryza sativa japonica (Japanese rice): 4333584
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Entry
4333584 CDS
T01015
Symbol
FIL2, OsYAB2, OsYABBY2, YAB2, YABBY
Name
(RefSeq) protein YABBY 2
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4333584 (FIL2)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
4333584 (FIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box
HMG_box_2
DUF4283
Ccdc124
Zn_ribbon_Elf1
Zn_ribbon_5
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
4333584
NCBI-ProteinID:
NP_001389121
LinkDB
All DBs
Position
3:join(26062068..26062142,26065958..26066080,26067448..26067574,26070391..26070439,26070597..26070672,26071235..26071345)
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AA seq
186 aa
AA seq
DB search
MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALP
AEDHLQDNLKMHNMSFRENYSEYGSSSRYGRVPMMFSKNDTEHMLHVRPPEKRQRVPSAY
NRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGLGSHESSKKLDEAIGAPSPQ
KVQRLY
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagatcgtgccggcgccggagcatgtgtgctacgtgcactgcaacttctgc
aacacaattttcgcggtcagtgttccaagcaatagcatgctaaacatcgtgaccgtccgt
tgtggccattgcactagcctgttgtcagtgaacttgcgaggattggtccaagcactccca
gcagaagatcatttacaggacaatttgaagatgcacaatatgagcttccgcgaaaactac
tctgaatatggctcatcttccagatatggccgagtgccaatgatgttctcaaaaaatgac
acagagcatatgctgcacgtgcgacctccagagaagaggcagcgggttccttcagcttat
aacagatttatcaaggaagagatccggaggataaaagcaaacaatcctgacataagccac
agagaagccttcagtactgcagcaaagaattgggcgcatttcccgaacatccatttcggg
ttaggctcccatgagagcagcaagaagctcgatgaggccattggagctcctagtccccaa
aaggttcaaaggctgtattga
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integrated database retrieval system
