Oryza sativa japonica (Japanese rice): 4333608
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Entry
4333608 CDS
T01015
Name
(RefSeq) membrin-11
KO
K08496
golgi SNAP receptor complex member 2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4333608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4333608
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
4333608
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
SpoVR
Mononeg_mRNAcap
KATNA1_MIT
Motif
Other DBs
NCBI-GeneID:
4333608
NCBI-ProteinID:
XP_015633085
UniProt:
Q6AT61
A0A0P0W0U6
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All DBs
Position
3:complement(join(26419689..26419850,26419973..26420122,26420211..26420331,26422904..26423205))
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AA seq
244 aa
AA seq
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MDFSGGGGGGGGATLSEMYQSARRLLLSARDGVARVERLASAPTSSSYSSAPLVGGGGGA
GDSAAAEEVRREVAQIQGLCAQMDRLWRSIPAKGQRDLWKRKVEQLSEEVDSLKETLDRH
SLRQKKRVLEAKERAELFERANGESSHVLRIFDDEAQAMQSARSSSRMLDEAYETGVAIL
HKYADQRDRLKSAQRKALDILNTVGLSNSVLKLIERRHRVDKWIAYAGMMITVVVMFVFW
RWTH
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccggcggcggaggcggcggcggcggcgcgacgctgtcggagatgtaccag
agcgcgcggcggctgctgctctcggcccgggacggcgtggcccgcgtcgagcgcctcgcg
tcggcgcccacctcgtcttcctactcctcggcgccgctcgtcgggggcggcggcggtgcc
ggggattcggcagccgccgaggaggtgcggcgggaggtggcccagatccaggggctgtgc
gcgcagatggaccggctctggcgatccatccccgccaagggccagcgtgatctctggaag
agaaaagtggagcagttgtctgaagaggttgattcgctaaaggaaacccttgacagacat
tctctgcggcaaaaaaagagggttctagaagcaaaagaaagggcagagctatttgagaga
gctaatggtgagtcttcacatgtccttcggatatttgatgatgaagcccaggcaatgcaa
tcagctcgtagctcctctcgtatgcttgatgaagcatatgaaacaggagtagctatcctt
cacaagtatgctgaccagagggatcgtctaaagagtgctcaaaggaaagcgttggatatt
ctgaacaccgttggtctatcaaattctgttttgaagcttattgagaggcggcaccgtgtg
gacaagtggattgcatatgctggtatgatgatcacagtggtggtgatgtttgtgttttgg
cggtggacgcattag
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