Oryza sativa japonica (Japanese rice): 4333719
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Entry
4333719 CDS
T01015
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00730
Thiamine metabolism
osa01100
Metabolic pathways
osa01240
Biosynthesis of cofactors
Module
osa_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
4333719
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
4333719
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
4333719
NCBI-ProteinID:
XP_015632971
UniProt:
Q10F62
Q0DPM7
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Position
3:join(27825960..27826249,27826358..27826485,27827110..27827936,27828756..27829430)
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AA seq
639 aa
AA seq
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MAALQPSFSSAMAMKSLKLPKTAVLPGFGGIARPQDVQDRSANFTCSRPRAASVTDQSTA
EPAKPRQNKHTVDPSAPEFLPLPSFEECFPRSTKESREIVHEESGHVLKIPFRRIHLTGD
EKHFDTYDTSGPQNISPRIGLPKIRKEWIDRREKLGGPRYTQMYYAKQGIITEEMLYCAT
RENLSPEFVRSEVARGRAIIPSNKRHLELEPMIVGRNFLVKVNANIGNSAVVSSIEEEVH
KLQWATMWGADTVMDLSTGRHIHETREWILRNSSVPIGTVPIYQALEKVNGIAENLSWEV
FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKENFAYE
HWDEILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWAKDVQVMNEG
PGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLC
YVTPKEHLGLPNRDDVKTGVISYKISAHAADLAKGHPYAQAWDDTLSKARFEFRWLDQFA
LSLDPVTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDIRKYADEHGYGTVEEAVI
QGMNAMSAEFSAARKTISGEQHGEAGGEIYVPESYTARK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctgcaaccctcattctcttcagcaatggctatgaaaagtctgaagttaccc
aaaactgcagttttacctggatttggtggtattgcacgtcctcaagatgtgcaggacagg
agcgctaacttcacttgttcaaggcctagagcagcttcagtgactgaccagtcaacagca
gagccagcaaaacccaggcaaaacaagcacactgttgatccttctgctccagaatttctg
ccactcccatcatttgaagaatgctttccaaggagcacaaaagaatccagagaaattgtg
cacgaggaatctggccatgtcctcaagatcccatttaggagaatccatttgaccggagat
gagaagcattttgacacatacgacaccagtggtccacaaaacattagtccaaggattgga
cttccaaagataaggaaggaatggattgacaggagggagaagttaggtggtcctcgatac
acacaaatgtattacgctaagcagggaatcataacagaggagatgttgtactgtgccaca
cgtgagaaccttagtcctgaatttgtccggtcagaggttgcccgtggacgagctataatt
ccttccaacaagaggcacctggaattggaacccatgattgttggacgaaacttccttgta
aaagtgaatgcaaacattgggaattctgctgttgtgagctccatcgaggaggaagtacac
aagctccagtgggctacaatgtggggagctgatactgtcatggacctttcaacagggcgt
catatccatgagacccgggaatggatccttcgtaattcttcagtccctattgggacggtg
cctatttaccaagcacttgagaaagttaatggtattgctgaaaatctaagctgggaagtc
tttagagatactttaatcgaacaagctgagcagggtgttgattacttcacaatccatgct
ggcgtgcttcttcgttacattcctcttacggcaaagagaatgaccggcatagtttcacgt
ggtggctctatccatgcaaaatggtgcctaacatatcataaggagaactttgcctatgag
cactgggatgaaattcttgatatttgcaatcagtatgatgtggcattatccattggcgat
ggtttgagaccaggttctatttatgatgcaaatgatagtgctcagtttgcagaattgctg
actcaaggggaactcacacgccgagcttgggcaaaagatgtgcaggtaatgaatgaaggc
ccagggcacattccgatgcataaaattcctgaaaacatggagaagcaactggagtggtgc
aatgaagcacctttctacacactggggccactgacaactgatattgcacctggttatgat
cacatcacctccgccattggtgctgccaacattggggctcttggcactgcacttctctgt
tatgtaacaccaaaggagcaccttggattgcctaaccgtgatgatgttaagacaggcgtg
atatcctacaaaatttctgctcatgctgctgatttggcaaagggccatccctatgcacaa
gcatgggacgatacactaagcaaggcaagatttgagtttagatggttggatcaatttgct
ctatctctggatcctgtgaccgctatgtctttccatgatgaaacattaccatcggagggt
gccaaagtggcacatttctgctcaatgtgtggcccaaagttttgttcgatgaaaatcaca
gaggatattagaaaatatgctgatgaacatggttacgggacagtggaggaagcggtgata
caaggaatgaatgctatgagtgctgagttttcagctgcaaggaaaacaatcagtggggag
caacatggtgaagctggaggggagatatatgttccagaaagctatacagctcgcaaataa
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