KEGG   Oryza sativa japonica (Japanese rice): 4333813
Entry
4333813           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K11790  denticleless
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4333813
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     4333813
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_DCAF12 Ge1_WD40 MIOS_WD40 Beta-prop_WDR11_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 4333813
NCBI-ProteinID: XP_015630059
LinkDB
Position
3:complement(join(28897024..28897512,28897722..28897770,28897864..28897931,28898019..28898087,28898202..28898286,28898367..28898446,28898517..28898595,28898760..28898836,28898921..28898987,28899096..28899192,28899289..28899385,28899512..28899550,28899654..28899718,28899845..28899953,28900086..28900298))
AA seq 560 aa
MATRPRSSPSFFGGLRARELGGGRVPLPRASAARLPYLADLSSYPGGRGSGVIAVEHAGD
PAIPFAISFCKAEQISHLLAVADEDGYVGIYDTRRRLPSSSSSLGKSAETKMSDWVAHNN
AIFDVCWIKDGSQLLTASGDQTVKIWSVENKKCLGVLSGHTGSVKSLSCHSSNPELIVTG
SRDGSFALWDLRIDPKTPNGHREACLMSSLVVKQAHSPTQRNRTRSRAKAASTSITSVLY
LKDDISIATSGAADNIVKIWDTRNIKLSLSNRSSQAAMQPLEGVKHGISCLSQDSYGAYI
AASCMDNRIYLYSALHMDKGPIKAYTGSKIESFFVKSAISPDGTHILGGSSDGNVYLWQV
DQPERGPIILEGHEGEATSVDWCASEVGKIATSSDDSKVRVWNTERRVFPNTSSPTVIRK
RITAPNTGSRSASHELATTSRDVGVAACTSADGELPTGSRSPLQPRVLEFGTPESAKKRA
FRLFQEDSLDIRKSPEAQMNSPSSVLSPPHSLKRRTIRDYFASSSSCEHTKHVHDLALLA
HSSTVKNLKNAQYSYRCLKK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcgacgcggccgcggtcctccccgtcgttcttcggcggcctccgggcacgcgagctc
ggcggcggcagggtgccactgccacgcgcctccgcggcgcggctcccctacctcgcggac
ctctcctcctaccccggcggccgcgggagcggggtcatcgccgtcgagcacgccggcgac
cccgccatacctttcgccatctccttctgcaaggcggagcagatctctcaccttctggcg
gtagctgatgaggacgggtatgttggcatctacgacacccgccggcgcctcccatccagc
tcatcgtcattggggaaatcagctgaaacgaagatgtccgattgggttgcccacaacaat
gccatctttgatgtgtgctggatcaaggacggttcccaattactgactgcatcaggcgat
cagactgtgaaaatatggtctgtggaaaacaagaaatgccttggtgttctgtcagggcac
accgggagtgtgaagtcgctgtcatgccattcttcaaacccagagctcattgttactgga
tcaagggatggttcttttgctctttgggatctaagaatcgacccaaaaacccctaatggt
caccgtgaagcttgtctcatgtcttcccttgttgtcaaacaagcacacagtcccacacaa
agaaatcgaacaaggtctagagcaaaggctgcttcgacgagtatcacatctgttctttat
ttgaaggatgatatctccattgctacttctggggctgcagacaacattgtgaagatatgg
gatacgcgaaatatcaaattgtctctctccaacagaagctctcaagcagcaatgcaacct
ttggagggtgtgaaacatgggatctcttgcttgtctcaagactcgtatggtgcctatatt
gctgcgtcatgcatggataacaggatctatttgtacagtgctcttcatatggataaaggc
ccaattaaggcttacactggcagcaaaattgaatctttttttgtcaagtctgctatcagc
cctgatggaactcacattcttggtggttcgagtgatggcaacgtgtacttatggcaggtg
gatcagcctgaaagaggtcctataattttggaaggccatgaaggtgaagctacttcagtt
gactggtgtgcatcagaggtcgggaagatcgcaacgtcatctgacgattccaaggttcgc
gtatggaatactgagagaagggtgttcccaaacacaagttccccaacggtcatccgcaag
agaataaccgcaccaaacactggaagccggtctgctagccatgagctagctactacctca
agagatgtaggagtagcagcctgcaccagtgcagatggtgaattgccaactggttcacgc
tctccccttcagcccagagtactggagtttggcacaccggagtcagcgaagaagagagcc
tttaggttgtttcaggaggactcattggacataaggaaaagcccagaggctcaaatgaac
agcccttcttcggttctaagccccccacattcactgaagaggagaacaattcgggactac
tttgctagtagctcatcttgtgagcacaccaagcatgtccatgaccttgcactcttggct
cactcgtcaactgtgaagaacctcaaaaatgctcaatatagctacaggtgcctgaaaaaa
taa

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