Oryza sativa japonica (Japanese rice): 4333826
Help
Entry
4333826 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12817
pre-mRNA-splicing factor 18
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4333826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4333826
Spliceosome [BR:
osa03041
]
Complex C
Other components
Step II factors
4333826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
4333826
NCBI-ProteinID:
XP_025879783
LinkDB
All DBs
Position
3:complement(join(29013006..29013398,29014620..29015375))
Genome browser
AA seq
382 aa
AA seq
DB search
MDVLKRELQRKRQLLDADFGGRKLLRRAEIERREMERIREAERRLLLQKQLRSSSSHHRA
ASRSTTTPGAPDGDESSRTEHRGDGEEKEGAPLLPREEVIRRLRVLRQPATLFGEDDAAR
LRRLHAVLEDPAALADVEAAEIGEGQTNDFLRDIQALRAKAVAASASAAAKPKAGAATAE
SGGETREEVPFEELCDEDKIMTFFKRLMSEWSQEMDEMPEAERRTAKGKAAVATCKQCAR
YLEPLFKLCKKKTLPEDVRGSLLEVVRCCMRRDYLAAVDNYIKLAIGNSPWPIGVTMVGI
HERSAREKIYANSVAHIMNDETTRKYLQSVKRLMTFCQRKYPTDPSRSVEFNSLANGSDL
QSLLAEQNSKNSEETLRLVAAS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcctgaagcgcgagctacagcggaagcgccagctgctcgacgccgacttcggc
ggccgcaagctcctccgccgcgccgagatcgagcgccgcgagatggagcggatccgggag
gccgagcgccggctcctcctccagaagcagctccggtcctcctcctcccaccaccgcgcc
gcgtcgcgctccacgaccacgccgggggctcccgacggcgacgagtcgtcgcggaccgag
caccgcggcgacggggaggagaaggagggcgcgccgctcctccccagggaggaggtcatc
cggcgcctgcgcgtgctgcgccagccggccacgctcttcggcgaggacgacgccgcgcgc
ctccgccgcctccacgccgtgctcgaggaccccgcggcgctcgccgacgtcgaagcggcg
gagatcggggagggccagaccaacgacttcctccgcgacatccaggcgctgcgggcgaag
gccgttgcggcgtcggcgtcggcggcggcgaagcccaaggctggcgctgcaactgcagag
agcgggggcgagacgagggaggaggtgccgttcgaggagctctgcgacgaggacaagatc
atgaccttcttcaagaggctgatgagcgagtggagccaggagatggacgagatgcccgag
gcggagaggcggacggcgaaagggaaggctgcggtggccacctgcaagcagtgcgcgcgc
tatctcgagccgctgttcaagctgtgcaagaagaagaccctgcccgaagatgtccgtgga
tcattgctggaggtggtgaggtgctgcatgagacgggactacttggcggcggtggacaac
tacatcaagctcgccatcggcaactcgccgtggccgatcggcgtcacgatggtgggcatc
cacgagcgctcggcgcgcgagaagatctacgccaacagcgtggcgcacatcatgaacgac
gagacgaccaggaagtacctgcagtccgtgaagaggctgatgaccttctgccagaggaag
tacccgacggacccgtccaggtcggtggagttcaacagcctggccaacggcagcgacctg
cagtccctcctggcggagcagaactccaagaactcggaggagacgcttcggctggtggcc
gcgtcgtga
Oryza sativa japonica (Japanese rice): 4343671
Help
Entry
4343671 CDS
T01015
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4343671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4343671
Spliceosome [BR:
osa03041
]
Complex C
Other components
Step II factors
4343671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
4343671
NCBI-ProteinID:
NP_001411185
LinkDB
All DBs
Position
7:complement(join(23317529..23317936,23319181..23320089))
Genome browser
AA seq
438 aa
AA seq
DB search
MDLLKRELEKKRKAATADFGGKSFVRRSELEQKQLQKRRHEEHRQLLSKAPPATSSASAA
GSDPSNPNADPAQSSAANPNPNSSSSAAAASVPPGLAGKKTAQDEALLSEERRIDELDLP
RHEVVRRLRILREPVTLFGEDDADRLARLKFVLKSGVIDDIDDLDMTEGQTNDFLRDMVE
LRKRQRAGRDTYVKGKGKRAGGGDGGEGGAGGDNADDGDGDGRRSGDDADADKDSKRMKT
KFEELCDEDKILVFFKKLLIEWNQELDEMPELEKRTAKGKSMVATFKQCARYLSPLFEFC
RKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKI
YTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQALLSEEKD
PGNPPSEDRLRLMPASKE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctgaagagggagctggagaagaagcggaaggcggcgacggccgacttcggc
gggaagagcttcgtgcggcggtcggagctggagcagaagcagctccagaagcggcgccac
gaggagcaccgccagctcctctccaaggccccgccggcgacctcctccgcctccgccgcg
ggctccgaccccagcaaccccaacgccgacccggcccagtcctccgccgcaaaccctaac
cctaactcctcctcgtccgccgccgccgcgtccgtcccgccgggcctcgcggggaagaag
accgcgcaggatgaggcgctcctctccgaggagcgccggatcgacgagctcgacctcccg
cggcatgaggtggtgcggcgcctccgcatcctgcgcgagcccgtcacgctgttcggggag
gacgacgccgaccggctcgcccgcctcaagttcgtgctcaagtccggcgtgattgacgac
atcgacgaccttgacatgacagaggggcagacgaacgacttcctccgtgacatggtcgag
ctccgcaagcggcagagggctggccgggacacctatgtcaagggcaagggcaaacgagcg
ggcggcggtgatggcggcgagggtggcgctggcggggataatgctgatgatggggatggg
gacggccggaggagtggggatgatgctgatgcggacaaggactcgaaacggatgaagacc
aagtttgaggagctgtgtgatgaggacaagatcttggtgttcttcaagaagctactcatt
gagtggaaccaggagcttgatgagatgccggagctggagaagaggacagcaaagggcaag
tcgatggtcgcaaccttcaagcaatgtgcgcggtatctcagccccctgtttgagttttgc
aggaagcaggttcttcctgatgacatccgtcaagcattgctcgttattgttgaatgctgc
atgaagcgtgattatttagcagcaatggaccaatacatcaagctggccattggcaatgca
ccatggcctattggtgtcactatggttggtatccacgagcgttcggcccgagaaaagatc
tacacaaacagtgtggcgcacattatgaacgatgagaccactcgcaagtaccttcagtca
atcaagaggcttatgaccctttgccagcgacgttatcctgctctgccctcaaaatcggtg
gagttcaacagcctggcaaatgggagtgacctgcaggcccttttgtcagaggagaaagat
ccaggaaaccctcctagcgaggataggcttcgactcatgccagcgtcaaaagagtga
DBGET
integrated database retrieval system
