Oryza sativa japonica (Japanese rice): 4333963
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Entry
4333963 CDS
T01015
Symbol
DBR1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4333963 (DBR1)
03009 Ribosome biogenesis [BR:
osa03009
]
4333963 (DBR1)
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4333963 (DBR1)
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
90S particles
RNase
4333963 (DBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
4333963
NCBI-ProteinID:
NP_001405528
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All DBs
Position
3:join(30361551..30361556,30361680..30361796,30362248..30362405,30362969..30363090,30363259..30363452,30364158..30364340,30364443..30364561,30364674..30364813,30365148..30365228,30365577..30365680)
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AA seq
407 aa
AA seq
DB search
MKIAVEGCMHGELDKVYDTLRELEKAEGVKIDLLLCCGDFQAVRNENDLQCLNVKPRFRE
MKSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYKQQHYHLGHYERPPYNENTIRSVYHVRHYDVLKLMHVKEPLDIFMSHDWPLGI
TEYGNWQKLIREKRFFEEEVNKRTLGSEPAARLLNKLKPPYWFSAHLHCKFPAVIQHGEG
GPTTKFLALDKCLPRRGFLQVIDIPSGPGPHEIQYDEEWLAITRKFNNVFSLTRMPFTML
DEQVDTQDDLQWVRNKLNARGAKPIDFVQTAASYDPSCQASNPSITVHCRNPQTESFLQL
LNLPYLLDSSNSYGVSRNESSSQTGQALDSDDIELPDDEDDPADDDD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcggtggaggggtgcatgcacggggagctggacaaggtctacgacacgctg
cgcgagctcgagaaggccgagggcgtcaagatcgacctcctcctctgctgcggcgacttc
caggctgttaggaacgagaatgatttacagtgtcttaatgtcaaaccaaggtttcgtgaa
atgaaatcattttggaagtactactcgggacaagctgttgccccatacccaacaatcttc
ataggtggaaaccacgaagcatccaattatttgtgggaactgtattatggaggatgggca
gcacccaacatctactttttggggttcgctggtgttgttaagtttggaaacattcgaatt
ggtggactatcaggaatatataagcaacaacattatcacttaggacactatgagaggccc
ccatacaatgaaaacactataaggtcagtgtaccatgtaaggcattatgatgttctcaag
ttaatgcatgtgaaggagcctctagatatattcatgtcacatgattggcctctgggcatt
actgagtacggaaactggcagaagcttattcgggagaaaagattctttgaagaagaggtc
aacaagagaacactaggcagcgaaccagcagcaagactactgaataaactaaaaccacca
tactggttttcagctcatcttcattgtaagtttccagctgttatccaacatggagagggt
gggcctacaactaagtttcttgcacttgataaatgtcttcctcggcggggctttctccag
gtaatagacattccatccggtccaggaccacatgagatccagtatgatgaagaatggctt
gcaataacacggaaattcaacaatgttttctccttaactcggatgccatttacaatgctg
gatgaacaggttgacactcaagatgacttgcaatgggttaggaacaagttaaatgccaga
ggggctaaacctattgattttgtccagactgctgcatcttatgatccttcttgtcaagca
tccaatccctccataacagttcattgtaggaatccacaaactgagtcttttctgcagctt
ctaaatctcccgtatcttctggactcatcaaattcttatggggttagtagaaatgagtca
agctcccagacaggacaagcacttgatagtgacgacatagagctccctgacgatgaagat
gatccggcggacgatgatgactga
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