KEGG   Oryza sativa japonica (Japanese rice): 4334042
Entry
4334042           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
  KO
K20296  vacuolar protein sorting-associated protein 51
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4334042
Membrane trafficking [BR:osa04131]
 Protein recycling
  Others
   EARP complex
    4334042
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    4334042
SSDB
Motif
Pfam: VPS51_Exo84_N Sec5 Dor1 EXOC6_Sec15_N COG5_N Vps54_N DUF4543 COG2_N
Other DBs
NCBI-GeneID: 4334042
NCBI-ProteinID: NP_001411511
LinkDB
Position
3:join(31131507..31131737,31132485..31132624,31132731..31132785,31132868..31132975,31133639..31133737,31133829..31133906,31134007..31134084,31135324..31135398,31135566..31135666,31136356..31136423,31136673..31136746,31137297..31137363,31137557..31137672,31137810..31138067,31138165..31138281,31138913..31138984,31139098..31139148,31139308..31139535,31140272..31140448,31140747..31140866)
AA seq 770 aa
MATAGGAAAAAAPQAMDEKARRTRDLLASFYNTDPSAAAAAAAASSAARPSPTAASASPL
DTINSASFDPDVYMNVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATD
TIKRMKTNIVGMEANMEQLLSKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQFI
YDLPTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFHDCKKASEEAIDLVTQHLKTKL
YSDSEPIESRAEAVVLLKQLNFPVDSLKSNLLEKLEDCLLNFQKEPTQASIGDISKTFRA
YLIIFPDSEKRLIELAQALFSNRYETVRENLRKRIPSTYLLAMLRSLWEDATAIDEVIPE
AALPAFSLETTRDIIRQHIATAFLHLQSEISDVLARTPSTSNGKLEESQLQTAMETSKVK
VLQGCIDLLQEFHHLIDGNTELLVKLRDLVIDWVQEGFQDFFQKLDGHFHMLSGRSKSPS
QEMESVQIDKVPTALVLMLAQLCVFIEQTAIPKVTEELASSFSGGGARSYEYGPPFVPGE
ICRLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEFNGV
VSEVKQVLPGLIRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLENHLAKLFEQ
KMEIFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFVD
DEAAISFLLKEVNNAAHERCLDPIPLEPPILDKLISAKLAKIKEQSPNMQ
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggcgaccgccgggggcgccgccgccgccgccgcgccgcaggcaatggacgagaaggcc
cggcgcacgcgcgacctcctcgcgagcttctacaacaccgacccgtccgccgctgcggcc
gcggccgcggcgtcctccgcggcgcggccatcccctaccgcggcctccgcgtcgccgctc
gacaccatcaactcggcctccttcgatcccgacgtctacatgaacgtcctggtgcaacaa
tcaaatctggaagctcttttacagaggcatgtgaagatggccgctgagatcaagaatctg
gatacagacttacaaatgctagtatatgagaattataacaagtttatcagcgcaactgac
actataaaaaggatgaagactaacattgttggcatggaagcaaacatggagcagctcctt
tcaaagataacatcagtgcaatcaagaagtgacacagtgaatacatctctttttgacaag
agggaaaacatagagaaactacatcgtacacgcaatctcctccgaaaagttcaattcata
tatgacctgccgactcggcttaacaaatgcatcaagacagaagcatatgcggatgctgtc
agattttttactggagcaaaacctattttcgaggcttatggcgacacttcctttcatgac
tgtaaaaaagcatctgaggaggcaatcgatttagttacacagcacttgaagacaaaatta
tattcagattctgaacctattgaatcaagagcagaagctgtggtgcttcttaaacagctc
aactttccggtggacagcctgaaatcaaacctacttgagaagttagaagattgcctctta
aatttccagaaggagcccacacaggcttcaattggtgatatttcaaagacattccgtgct
tatctcataatatttcctgattcagaaaagcgcctcattgaacttgcacaggctttgttc
tcaaaccggtatgaaacggtcagagagaatctgaggaaaagaattccatcaacatatcta
ttggctatgttacgatccttatgggaggacgccactgccattgatgaagttatacctgag
gctgcattaccagctttttctctggagactactcgggatattattagacaacatatcgca
actgcctttcttcatcttcaaagtgaaatatcagatgtactcgccagaacaccctcgaca
tcaaatgggaagttagaagagtcacagctgcaaactgccatggaaacaagcaaggttaaa
gtattgcaaggatgtatagatctcctgcaggaatttcatcatcttatagatggcaataca
gagttacttgtaaaactgagagatttggttattgattgggtacaagaaggttttcaagat
ttctttcagaaacttgatgggcattttcatatgctttctgggagaagcaagagtccatct
caagagatggaatcggtgcaaattgataaggttccaacggctttggtgcttatgcttgca
caactttgtgttttcatagaacaaacagcaattcccaaagtcacagaggagttggcttct
tctttttctggaggtggtgcacgtagctatgaatatgggccaccttttgtgcctggagag
atatgccggctttatcgttcatctggggagaagttcttacatcattacataaatatgaag
acacagaagatctccaaacttcttaataaacgatttacaactccagtctggataaagcac
aaggagccgcgggaagtgaatatgtttgttgatctacttctcctagagttcaatggagta
gtgtctgaagtcaaacaggtattacctggtttgattcggcgacatcgacattctgatagc
actggcagcacaacttcctcaagaagtaatccaatgcgagaggacatgttgaaccgatca
aacacacaccgtgccagaagtcaatttttagaaaatcatctagcaaaattattcgagcag
aaaatggaaatattcaccaaagttgaatacacacaggaatctgtaatttctgctgtcctc
aagctctgcctgaaaagcttgcaagaatttgttcggcttcagacattcaacagaagtgga
tttcagcaaattcagctggatatggaatttctcaagacatcccttaaggagtttgttgat
gatgaagcagctattagctttttacttaaagaggtgaacaatgctgctcacgagagatgt
cttgacccaatccctctcgagccgcccatattggataagctcatcagtgcaaaactagca
aagattaaagagcaaagtccaaatatgcagtag

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