Oryza sativa japonica (Japanese rice): 4334103
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Entry
4334103 CDS
T01015
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4334103
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4334103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
4334103
NCBI-ProteinID:
XP_015631696
LinkDB
All DBs
Position
3:join(31660757..31660787,31661018..31661091,31661199..31661358,31661441..31661508,31661734..31662279,31662531..31663118,31663198..31663410,31663763..31663909,31664033..31664194)
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AA seq
662 aa
AA seq
DB search
MAAVAPGAGDQATDMMQKLSLESKKEGATPDATKKPAGMPYGSASAGDAQNAASPVDRSI
TPLLQEAVNANILYQTNGYGPSAYYYPTGYDGSANEWDSRYAAHDGTEMPPQSVYGDMYG
YGYAPYGPYPSGSPVPTVGHDGQSYGAQHYQYPGQYYQQPAPTNASHGVNAVNSQSEMPS
VAAHQARVPVESAKASANGTANGMANTNSSSLARKQTHQNVSVLNNGSYGGGTLQGGPSA
NNYGHSGLHSPVQWYDGPVYSNGHQRSNTNSTSYGSNSYSAKNQSQRPTANLMGMHAQIP
SSGMGLTSPSYHTRMYPDNRLYGQYGQYGNALKTGLGFGSNMYNSRNNGRWGIVDSKYKP
RGRASFGFGSENQDGFTELNRGPRSGGFKHQKQFGPSVTIAVKGQALPSVGKQENSAIPD
KGQFNQEGFPVTYKDAKFFVIKSYSEDDVHKSIKYNVWASTPNGNKKLDAGYREAQEKSS
ECPVFLFFSVNTSGQFVGVAEMVGPVDFEKTVDYWQQDKWNGCFPIKWHVVKDVPNNILK
HITLDNNDNKPVTNSRDTQEVKLEQGLEMLKIFKDHISKTSILDDFGFYENRQKLMQEKR
AKQQLLQGQGSLDNASHEKEKNAIDGKSTAQKQALSKEGTPIVGEMLNASKSAVESSVTN
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttgctcctggcgctggcgaccaggctactgacatgatgcagaagctgtcg
ttggagagcaagaaggaaggcgccacccctgacgctaccaagaagcctgccgggatgccc
tatggatctgcaagcgccggcgatgcgcagaatgcggcgtcgccggtggacaggtcgatc
actcccctgctccaggaggccgtgaatgccaacatcttgtatcagaccaatggatatgga
ccctcagcatattactatcctactggttatgacggctcagccaatgaatgggactccaga
tatgctgcccatgatggaacggagatgcctcctcagagtgtttatggtgacatgtatgga
tatggctatgctccctatggcccatatccttctggttctcctgtcccaactgttgggcat
gatggccagtcatacggcgcacagcattaccagtaccctggtcaatattatcagcaacca
gctccaaccaatgcaagccatggcgtcaatgctgtcaattctcagtctgagatgccctct
gttgctgctcaccaggcacgtgttccggttgaatcagcaaaagctagtgccaatgggact
gctaatgggatggcaaatactaacagtagttcattagcacgtaagcaaacccatcaaaat
gtatcagtattaaacaatggttcatatggaggagggactttgcaaggtggaccatctgct
aacaattatggtcacagtggtcttcattctccagttcagtggtatgatgggccagtctac
tctaatgggcatcagagatcaaatactaattccacatcttatggttctaactcgtattca
gcaaaaaatcagagccagcgcccaactgcaaacctcatgggtatgcatgcacagatacct
tcgtcgggaatgggtttgacatctcctagttatcataccaggatgtacccagacaacaga
ttatatgggcagtatggtcagtatgggaacgcacttaaaactgggcttggtttcggatca
aatatgtacaactccagaaataatggacggtggggaattgttgatagcaagtacaagcct
agaggtcgtgcatcttttggttttggcagtgagaaccaagatggcttcactgagcttaac
agaggaccaagatctggaggattcaagcaccaaaaacagtttggaccttctgtcactatt
gctgtgaagggccaagccctcccctcagtcgggaaacaggagaatagtgccattccagat
aagggccaattcaaccaggaaggttttccagtaacatacaaagatgcaaagttctttgtt
atcaaatcttacagtgaggatgatgtgcacaaaagtataaaatacaatgtgtgggcaagc
actcctaatggaaacaagaagctggatgctggataccgtgaagcgcaggagaaatccagt
gaatgcccagtcttcttgttcttctctgtaaacacaagtggccagtttgttggtgttgct
gaaatggttggtcctgttgattttgagaagacagtggattattggcaacaagacaagtgg
aatgggtgttttccaatcaagtggcatgttgtcaaggatgtacccaacaacatcttgaag
cacattacattggataacaacgacaataagcctgtgacaaacagccgtgacacacaagag
gttaagcttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagaca
tcaatcttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagaga
gctaagcagcaactgcttcaaggacagggctctcttgacaatgcttcacatgaaaaggag
aagaatgcaattgatgggaaatccacagctcagaagcaggcattgagcaaggagggcacc
cctattgtcggcgaaatgctgaacgcctcaaaatctgcagttgaaagcagtgtaacaaat
ggcaattag
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