Oryza sativa japonica (Japanese rice): 4334331
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Entry
4334331 CDS
T01015
Name
(RefSeq) AP-1 complex subunit sigma-1 isoform X1
KO
K12394
AP-1 complex subunit sigma 1/2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
4334331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4334331
Membrane trafficking [BR:
osa04131
]
Endosome - Golgi transport
Others
AP-1 complex
4334331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
Motif
Other DBs
NCBI-GeneID:
4334331
NCBI-ProteinID:
XP_015628194
UniProt:
A0A5S6R8M9
Q94GI1
LinkDB
All DBs
Position
3:complement(join(33485457..33485528,33485888..33485974,33486108..33486143,33486232..33486340,33486453..33486544,33487074..33487226))
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AA seq
182 aa
AA seq
DB search
MDLVLGLRWMNFLPFAVVGLLQINFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLI
LTRGPKLCNFVEWKGYKVVYRRYASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVC
ELDLIFNFHKAYYILDEILIAGELQESSKKNVARLIAAQDSLVEAAKEEASSISNIIAQA
TK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggatctagtgttgggactgagatggatgaactttctgccatttgctgttgttggtctt
ctgcagatcaatttcgtgctcctgatcagccgccagggcaaggtgaggcttaccaagtgg
tactcgccttacacccagaaggagaggactaaggttatccgtgagctcagtgggctcatt
ctaacacgcgggccaaaactctgcaactttgttgagtggaagggttacaaggttgtgtac
agaaggtatgcgagcctgtatttctgcatgtgcattgatgctgaggacaatgagctcgag
gtccttgaaattatccatcacttcgttgaagtactggaccgatattttggcagcgtatgc
gagctggatttgatattcaatttccacaaggcctactacatacttgatgaaattctcatc
gctggtgagcttcaagaatctagcaagaaaaatgttgcaagactaattgctgcacaggat
tcattggtagaggcagctaaagaggaagctagctctataagcaacatcattgcccaggct
acaaaataa
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