Oryza sativa japonica (Japanese rice) (RefSeq): 4334354
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Entry
4334354 CDS
T01015
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03420
Nucleotide excision repair
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4334354
09124 Replication and repair
03420 Nucleotide excision repair
4334354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4334354
03400 DNA repair and recombination proteins [BR:
osa03400
]
4334354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4334354
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
4334354
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
4334354
TCR (transcription coupled repair) factors
Cul4-CSA complex
4334354
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4334354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Pox_VLTF3
DUF808
Motif
Other DBs
NCBI-GeneID:
4334354
NCBI-ProteinID:
XP_015632421
UniProt:
Q10CD7
LinkDB
All DBs
Position
3:32672019..32679109
Genome browser
AA seq
836 aa
AA seq
DB search
MSHPHATAPKRPGHFSSSSAAASSPTSPAQPHMKKAKFPGSSSSSSSAAAPGVTEKNGLH
VDPTAAAARTGGRTNGEEDAEMVLADQEELAAPSASAPAGVAANLFRKKATLPQPSAARK
PLRIKIGQPKLPTNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLY
ERIKKECEVHISAKISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKN
VANICSVWDMGLKLFRKHLSLSPEIEHKTVTGLLRLIESERLGEAIDRTLLSHLLKMFTA
LGMYSESFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHVETRLQEEHERCILYLEANTR
KPLITATEKQLLQRHTSAILEKGFTMLMEANRVKDLSRMYTLFQRVDAIELLKQALSSYI
RGTGQGIIMDEEKDKELVPFLLEFKASLDRILEESFAKNEAFSNTIKESFEHLINLRQNR
PAELIAKFLDEKLRAGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLG
KSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEM
SVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFP
KGKKELAVSLFQSVVLMLFNDAQKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMP
KGRDVEDKDEFVFNEEFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRI
MKTRKTLSHTLLITELFQQLKFPIKPSDIKKRIESLIDREYLERDRSNPQIYNYLA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccccacgccaccgcccccaagcgccccggccacttctcctcctcctccgcc
gccgcctcctccccgacctcccccgcgcagccgcacatgaagaaggccaagttccccggc
tcctcctcctcctcctcctccgccgccgcccccggggtcaccgagaagaacgggctccac
gtcgatcccacggccgccgccgcccggaccggtgggcgcaccaacggcgaggaggatgcg
gagatggtgctcgccgaccaggaggagctcgccgctccgagcgcatcggccccggcgggg
gtcgccgccaacctcttccggaagaaggccacactcccccagccatccgccgcccgcaag
cccctccgaatcaaaataggtcagccaaaattgccaacaaactttgaggaggatacatgg
gctattttgaaagatgctattacagctatatttctaaaacagaaactttcgtgcgatgtt
gaaaaactttaccaggctgcaggtgacctttgtctacacaagctaggcgcaaatctatac
gaacgcataaagaaagaatgtgaagtacacatatcggcaaaaatatcagcattagtgggt
caaagtccagatttagtagtatttttgtctctggtgcaaagaacatggcaagatttttgc
gatcagatgttgattattcgtggtattgctttacttcttgatgtaaaatatgtcaagaat
gttgcaaacatttgttcagtgtgggacatggggttgaagctattccgcaagcatctttca
ctgtctccggagattgaacacaaaactgttactggtcttctaagattaattgagagtgag
aggcttggtgaagcaatagacaggacattacttagtcatcttctgaagatgtttactgct
cttggaatgtattctgagagttttgaaaagccctttctggagtgtacatctgaattttat
gctactgaaggtgttaaatatttgcagcagtctgatattccagactatctcaagcatgtg
gagacaaggttgcaagaagaacatgaaaggtgtattctatatttggaagctaacactagg
aagccgcttataacagctacagaaaagcaattattgcagcggcacacatctgcaattctt
gagaagggattcacaatgcttatggaagcaaatcgtgtaaaagacctctcgaggatgtac
acactcttccagagggttgatgccattgagttgctaaagcaagcacttagttcatatatt
cggggcacaggccagggcattatcatggatgaagaaaaggacaaagaactggtgcccttt
cttctggaatttaaggcatcgcttgatagaatattggaggaaagttttgccaaaaatgag
gctttctccaatacaataaaagagtcattcgaacatcttatcaatttacgccagaatcga
cctgctgaattgattgcgaagtttcttgatgagaaacttcgagctggaaataaaggtacc
tccgaagaagagctggagggaatattggataaagttttggttctgttccgatttatacaa
ggaaaagatgtatttgaggcattctacaagaaggatctggctaagaggttgctgctgggg
aagagtgcatcgatagatgctgaaaaatcaatgataacaaagctcaaaactgagtgtgga
agtcaatttaccaacaagctggagggaatgttcaaggacattgaattatccaaagaaata
aatgagtctttcaagcaatcatctcaagcaaggacaaagcttccatctggcattgaaatg
agtgttcacgtgcttacaacaggctattggccaacatatccaccaatggatgtgaaactc
ccccatgaacttaatgtctatcaggatatatttaaagaattctatttgagcaagtatagt
ggaaggcgtttgatgtggcaaaactcattgggtcactgtgtattaaaagcagagttccca
aaaggtaaaaaggaacttgcggtgtcactatttcagagtgtggttttgatgttgttcaat
gatgcacaaaaactaagcttcctcgatatcaaggaatcgactggtattgaggataaagaa
ttgcgaagaacgctgcaatcacttgcatgcggtaaagttcgggttctccaaaagatgcca
aaagggcgagacgtagaagataaggacgaatttgtatttaatgaagaatttagtgcccct
ctctatcgcataaaggtgaatgctattcagatgaaggagacggttgaagaaaacacaagc
acaactgagagagtattccaggacagacagtatcaggtggatgctgccatagttcgaata
atgaagacacgtaaaaccctcagccacacgcttctaataactgagctttttcagcagctc
aagttcccaatcaagccatcggatatcaagaaaagaatagagagcctaatcgacagggag
tacctggagagagacaggagtaacccccagatctacaattacctggcttga
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