Oryza sativa japonica (Japanese rice): 4334356
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Entry
4334356 CDS
T01015
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4334356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4334356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4334356
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
4334356
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
4334356
Exosomal proteins of other body fluids (saliva and urine)
4334356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF3377
T2SSF
Pox_EPC_I2-L1
RNF152_C
ASFV_P17
DUF2116
UstYa
Motif
Other DBs
NCBI-GeneID:
4334356
NCBI-ProteinID:
XP_015628438
UniProt:
Q6F3B4
LinkDB
All DBs
Position
3:33666495..33667487
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AA seq
330 aa
AA seq
DB search
MNNLFSSSWKRTGGGGGGDGDIESGGGVEMAPPPGAAAGASLDRFFEDVESIKDELRDLE
RIQRSLHDANEGGKSLHDAAAVRALRARMDADVAAAIKKAKVVKLRLESLDRANAANRSV
PGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISSEYRETVARRYYTVTGEQPDE
ATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHGAVAELERSLLELHQVFNDMA
VLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKSTRKWTCIAIIILLVLILVVV
LPIVLKFVNNNKSSSSSPAPATPSPPPPTA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctcttctctagctcgtggaagcgcaccggcggcggcggcggcggcgacggg
gatattgaatcgggcggcggcgtggagatggcgccgccgccgggggcggcggcgggggcg
agccttgataggttcttcgaggacgtggagtcgatcaaggacgagctccgcgacctggag
cggatccagcggtcgctccacgacgccaacgaggggggcaagtcgctgcacgacgcggcg
gcggtgcgcgcgctgcgggcgcgcatggacgccgacgtcgccgccgccatcaagaaggcc
aaggtggtgaagctccgcctcgagtcgctcgaccgcgccaacgccgccaaccgctccgtc
cccgggtgcggcccgggctcctccaccgaccgcacccgcacctccgtcgtcgccggcctc
cgcaagaagctccgcgactccatggaatccttctcctccctccgcgcccgcatctcctcc
gagtaccgggagaccgtggcgcggcggtactacaccgtcaccggcgagcagcccgacgag
gcgacgctcgacaacctcgccgagaccggggaaggggagcggttcctgcagcgcgcgatc
gccgagcagggccgcggcgaggtgctcggcgtggtcgccgagatccaggagcggcacggc
gccgtggcggagctggaacgctcgctgctcgagctccaccaggtgttcaacgacatggcc
gtgctggtggcggcgcagggggagcagctcgacgacatcgagacccatgtcggccgcgcg
cgctccttcgtcgaccgcggccgcgagcagctggtggtggcgcggaagcatcagaagagc
acccgcaagtggacctgcatcgccatcatcatcctgctcgtcctcatcctcgtcgtcgtc
ctccccatcgtgctcaagttcgtcaacaacaacaagagcagcagcagctcgccggcgccg
gcgacgccgtcgccgccgccgccaacggcatga
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