Oryza sativa japonica (Japanese rice): 4334369
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Entry
4334369 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4334369
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4334369
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4334369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
DUF4302
zf-Nse
Motif
Other DBs
NCBI-GeneID:
4334369
NCBI-ProteinID:
XP_025879904
LinkDB
All DBs
Position
3:complement(join(33755647..33755947,33756032..33756139,33756229..33756596,33756708..33756807,33756881..33756943,33758141..33758187,33758286..33758417))
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AA seq
372 aa
AA seq
DB search
MDEKVKMESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEW
CQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAVFHHPVLGDFEVPVGAD
DAELEERIIQHLAAAAAMRRSHRHGRRDGHRSRSGSHSRPQIVVFSRNEAIPGGSLHASS
GQDEDHEQSSDLGSAHPFAALAAVDQGHMSGGSQLYVGHSDQGASNPSLHDERAMSRTSE
NQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSITKSTRGWKERWFSRSNTISGLG
TEVRREVNAGIAAVSRMMERLETKDDTGPSAVPAASACSPSDANNQRTVSPNHAAVVNET
SSTTCASGSGSQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaaggtgaagatggagagcaagctgtcctccgcggcggcgttcgtggaggga
ggtgtgcaggacgcctgcgacgacgcctgcagcatctgcctcgaggccttctgcgacaac
gacccctccacggtgacgagttgcaagcatgagtaccatctgcagtgcattcttgaatgg
tgccagagaagctctcagtgtcccatgtgttggcagcctatcagcatgaaggatcctatg
agccaagaactacttgaggctgttgagcaagagaggaacattcgagctaaccgtttgaac
actgccgctgtttttcaccatccagtattgggtgattttgaggtccctgtaggagctgat
gatgctgaacttgaggagcgcattatacaacacttggctgctgctgctgcaatgcgtagg
tcacacagacatggtagaagagatggacatcgtagccgatctggatctcatagccgccca
caaatcgtggtgttttcaaggaatgaggctattcctggtggctccctgcatgcaagttca
ggccaagatgaagaccatgaacaatcttctgacttaggttctgctcatccttttgctgct
cttgctgctgtagaccaaggacatatgagtggtggttcgcagctatacgtgggtcattct
gaccagggtgcttcaaatccatctctgcatgatgagagagcaatgagcaggacatctgaa
aatcaatctgcacctgtcaatcaagatacagcaggaccatctgatttgcagtcattctct
gacacgctgagatctcgcctacagtcagcttcgatgaagtataaagattctataacaaag
agtacgcgtggatggaaggaaagatggttttctcggagtaacactatatcaggtcttggc
actgaagtaaggagggaggtcaacgctgggattgctgcggtatctcgcatgatggaacgg
ctagaaacaaaggacgatactggaccatctgctgttcctgcagctagtgcttgctctcct
tcagacgcaaataatcaaaggacggtatcccccaaccatgctgctgttgtaaatgaaact
tcttccacgacttgtgcgtcaggatctggctctcaatga
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