Oryza sativa japonica (Japanese rice) (RefSeq): 4334389
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Entry
4334389 CDS
T01015
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4334389
03420 Nucleotide excision repair
4334389
03430 Mismatch repair
4334389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4334389
03036 Chromosome and associated proteins [BR:
osa03036
]
4334389
03400 DNA repair and recombination proteins [BR:
osa03400
]
4334389
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
4334389
DNA Replication Termination Factors
ELG1-RFC complex
4334389
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
4334389
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
4334389
Check point factors
HRAD17(Rad24)-RFC complex
4334389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Rad17
AAA_16
Sigma54_activ_2
AAA_5
DUF5906
RuvB_N
DUF815
DNA_pol3_delta
RsgA_GTPase
ABC_tran
Mg_chelatase
AAA_22
Rep_fac_C
AAA_29
AAA_2
AAA_24
FtsK_SpoIIIE
TsaE
RNA_helicase
ATPase_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
4334389
NCBI-ProteinID:
XP_015630600
UniProt:
Q852K3
LinkDB
All DBs
Position
3:complement(32964606..32967806)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFG
AGADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKN
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQY
PFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAE
LLKKLDSDLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVSTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagtacaggccgaaaaccctagacaaggtcaccgtccatgaccag
gtcgcgcaaaacctcaagaagctggtggcggagcaggattgcccgcacctgctcttctat
gggccgtcggggtccgggaagaaaaccctagtcatggccctcatcaagcagatgttcggc
gcaggcgcggataaggtgaagatggagaacaagacatggaagatcgatactgggtcgagg
aatattgagatagaactggcaatgttgtcgagcgcccaccatgtggagatgaaccccagc
gatgctgggtttcaggacaggtatgttgttcaggaagtcattaaagagatggcgaagaat
aggccaattgatgccaagggcaagagagcatttaaagtccttgtccttaatgaagtcgac
aagctctcacgagaagcccagcattcccttcgtaggacaatggagaagtacagtgcatca
tgcaggctgatattgtgctgtaatagctcatcaaaggtgacagaggctgtaaggtctcgt
tgcttgaacgtgcgagtgaatgcacccagtgaagaccagatcgtccaagttctggagttc
attgggaagaaagaaaatctgcagcttccatttggatttgctgctaggatagcagcacaa
tcgaaccgtaacctgagacgagcgatactgttttttgagacctgcaaagtccagcaatac
ccatttacatcaaatcaagtagcacctcctcttgactgggagcaatatgtgtcagaaata
gcagctgatatcatgaaagaacaaagccctaaaaggctatttgctgtgcgccagaagttc
tacgaattacttgtgaattgtatcccacctgaaagcatcttaaagaagttgttggcggag
ttactgaagaaattagactctgacttgaaacatgaaatttgtcactgggctgcacactat
gaacacaagatgcgtcttgggtccaaggccatttttcacctagaagctttcgtcgccaag
ttcatgagcatctacaaggaatttcttgtctctacatttggctga
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