| Entry |
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| Symbol |
MET1, MET1-1, MET1A, OsJ_12965, OsMET1-1, OsMET1a
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| Name |
(RefSeq) dNA (cytosine-5)-methyltransferase 1A isoform X1
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| KO |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
| osa00270 | Cysteine and methionine metabolism |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
4334435 (MET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:osa03000]
4334435 (MET1)
03032 DNA replication proteins [BR:osa03032]
4334435 (MET1)
03036 Chromosome and associated proteins [BR:osa03036]
4334435 (MET1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:osa02048]
4334435 (MET1)
Enzymes [BR:osa01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
4334435 (MET1)
Transcription factors [BR:osa03000]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
4334435 (MET1)
DNA replication proteins [BR:osa03032]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
4334435 (MET1)
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
4334435 (MET1)
Prokaryotic defense system [BR:osa02048]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
4334435 (MET1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:join(34247061..34247094,34247504..34248965,34249213..34250692,34250803..34250967,34251077..34251269,34251347..34251458,34251547..34251694,34251796..34251993,34252079..34252357,34252457..34252618,34252717..34252935,34253326..34253457)
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| AA seq |
1527 aa
MAKSPRSVVTTGTKRRRAKVHKEDEPVENENLESEFDVSKKESNGATEPGNEPVASKRPK
RAAACSNFKEKSLDLSEKDSIITIKESRVEEKEIEAVNLTRTGPEDGQPCRKIIDFILHD
GDGNLQPFEMSEVDDIFITALIMPLDDDLEKDRGKGICCSGFGRIENWAISGYDEGAAVI
WVSTETSDYKCVKPASSYRSYFEHFSEKARVCVEVYKKLARSVGGNPQVDLEELIAGVVR
SINSNRSFNGTVTKDFVISSGEFIYKQLIGLDHTAGNDDEMLATLPVLVALKDECKSRAG
FTHLPAMPSNGTLRIKDGQDKGLTEDEDAKLARLLQEEEEWKMMKQRGKRGTSQKNIYIK
ICETEIANDYPLPAYYKPYNQEMDEYIFDSDIGMYSDDVPVRILDNWALYNSDSRLISLE
LIPMKAGAENDIVVFGSGFMREDDGSCCSTAELAQLHSSSSKSGREDPGVPIYLSPIKEW
VVEFGGSMICITIRTDVAWYKLRQPTKQYAPWCEPVLKTARLAVSIITLLKEQSRASKLS
FAEVIKKVAEFDSRHPAFISSKAPTVERYVVVHGQIILQQFADFPDESVKRCAFITGLLA
KMEESRHTKLAIKKKSQQMRGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYYATYFP
GDTKEEDQNEPKEIDDDQEENEDNDAEEEVNVQDEKATRTPPSTRSRKSSADTRKEIKWE
GQTAGKTVSGEVLYKCVIVQDLSISVGATVTTEDDSGETIMCFVEYMYEKLDGKNMIHGI
ILQEGSQTVLGNAANDREVFLTNDCLEFEASDIKELVTVNIQSLPWGHKYRKENSEAKRI
EKAKAEERKRKGLPVEYICKSLYWPEKGGFFSLPYDKIGNGTGICSSCERKPVGNEFKLL
SESSFVFENITYNIHDFLYIRPEFFSQGEGHETYKAGRNVGLKPYAVCHLLSVHGPAGSR
KANPESTKVKVRRFYRPDDISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLP
NSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGS
DKPKDGQSENCLATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVF
VENCNVILKAIMDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGF
SGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLE
MGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFY
AAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMASLNDH
ISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGL
YGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNKH
RQIGNAVPPPLAYALGRKLKQAIDAKR |
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| NT seq |
4584 nt +upstreamnt +downstreamnt
atggcgaaaagtccacgttctgttgttaccacaggaacaaaaaggcgtagagcaaaggtt
cataaagaagatgagcctgttgagaatgaaaacttggagagtgaatttgatgtttccaag
aaagagagcaatggtgccactgaacctggtaatgagcctgttgccagcaagagaccgaag
agagcagctgcctgttctaacttcaaagagaagtcattggacttatcagaaaaagattca
attatcacaatcaaggaaagtcgggttgaagagaaggaaatagaggctgttaatttgaca
aggacgggacctgaagatggtcaaccttgcagaaaaatcatcgatttcatcttacatgat
ggagatggtaatctgcaaccctttgaaatgtctgaagttgatgacattttcataacagct
cttatcatgcccttggatgatgatctggaaaaggataggggaaagggaatatgttgttcg
gggtttggacgaattgaaaactgggcgatttctggctatgatgaaggtgctgcagtaatt
tgggtctcaacagaaacatcagattacaaatgtgtgaagccagcaagcagttacagatct
tattttgaacactttagtgagaaggcacgtgtctgtgttgaagtctataagaagttagct
agatcagttggtggaaatcctcaggtggacttagaagaattaattgctggtgttgtccgt
tccattaattcaaacagaagcttcaacggaacagtaaccaaagactttgtgatctcctct
ggtgagttcatatataaacagcttattggattagaccatacagctggcaatgatgatgag
atgttggccacactgccagttcttgttgcactgaaagatgaatgtaaatcaagagcagga
ttcacacatttgccagctatgccctcgaatggaactctgaggattaaggatgggcaagac
aagggactgactgaggatgaggatgcaaaattagcaagactgttgcaggaagaggaagaa
tggaaaatgatgaagcagagaggcaagcgtggaacttcacagaaaaatatctacatcaag
atttgtgaaactgaaattgccaacgactacccacttccagcctactataaaccatataac
caagaaatggatgagtacatatttgatagtgatattggtatgtattctgatgatgtacct
gtaagaatccttgacaactgggctctatacaattcagattccagactcatttctttggag
ctcatccctatgaaagctggtgcagaaaatgatattgtggtatttggatctggttttatg
agagaggatgatggtagttgctgttcaacagctgagctagcacagttacattcttcctca
agtaaatctggccgggaagatccaggagttccaatttatttgagcccaattaaagagtgg
gttgtagaatttggtggttcaatgatctgcataaccattcgaactgacgttgcttggtac
aaattacgccagccaacaaagcaatatgctccatggtgtgagcctgtgctgaaaacagca
aggctagctgttagtatcatcacccttttaaaagagcaaagtcgcgcttcaaagctttct
tttgctgaagttatcaagaaagtagcagaatttgacagtagacaccctgcatttatatca
tcgaaagcaccaaccgttgaaagatatgtcgtggtgcatggacagataatacttcagcag
tttgcagactttccagatgaatctgtcaaacggtgtgccttcatcacaggtcttctagca
aagatggaggaaagtaggcacacaaagttggccatcaagaaaaaatctcaacagatgaga
ggggagaatctgaacccaagcgcaaaaatgggtccaatactgagaaagaagcttatgcgt
gctacaactacaatgttgatcagcaagatatggggtgaatactatgccacttatttccct
ggggatacaaaggaagaagatcagaatgaaccaaaggaaattgatgatgatcaagaagaa
aatgaagacaatgatgctgaagaggaggtaaatgttcaagatgagaaggccacaaggact
ccaccatcaacacggtctagaaagtcgtcagcagatactcgcaaggaaatcaaatgggaa
ggtcaaacagctggaaaaacagtgtctggagaagttctgtacaaatgtgttattgttcaa
gacctcagtatttctgttggtgcgacagtcacaacagaggatgattcaggagaaaccatc
atgtgttttgttgagtatatgtatgagaaacttgatggtaaaaatatgattcatgggata
attctgcaagaaggttcacagactgttcttggcaatgctgcaaatgatagagaggttttc
ttgactaatgactgtttagaatttgaagcaagtgacatcaaagagttggtgactgttaat
atccaatcactgccttggggccacaagtacagaaaagagaattctgaagctaagagaatt
gaaaaggccaaggcagaggagaggaaaaggaagggcctgccagtggaatatatttgcaaa
agcttatactggcctgagaaaggtggattcttctcccttccgtatgataaaattggaaat
ggcacaggcatctgtagctcctgtgagagaaaaccagttggcaatgaattcaagttactt
tctgagagcagctttgtctttgagaatattacgtataacatccatgactttctgtatatc
aggcctgaatttttctcccaaggggagggccatgagacctacaaggctggaaggaatgtg
ggtctaaaaccttatgcagtctgccatctgctgagtgttcatggtcctgctggatcaagg
aaagctaatccagaatcgacaaaagtgaaagtaagaaggttttaccgacctgatgacatt
tcatcaacaaaagcctactcatcagacatccgagaggtgtactacagtgaagatataata
agtgtacctgtggtgatgatagagggaaaatgtgaggttcgactgaaggatgaccttcca
aattcagatcttccagcggtggttgaacatgtcttttgttgtgaatatttatatgatcct
gctaatggagctctcaaacagctaccgcccaatgttagacttgtgacactgacaaggaag
gtacctgcttcaaaaaagaacaaaggaaagcaaatttgtgacattgagctaggtggttca
gacaaaccaaaggatgggcaatcagagaactgtcttgcaacacttgacatttttgctggt
tgtggaggtttatctgaaggattgcagcgatcaggattgtcacttactaaatgggctatt
gaatatgaagaacctgctggggatgcatttggtgaaaaccatccagaagctgcagtattt
gtcgaaaactgcaatgtgattctgaaggcaattatggacaagtgtggtgattctgatgat
tgcatctccacttctgaggctgctgaacgagcagctaaactttctgaggacaagattaag
aatctgcccgtgcctggcgaagtagaattcataaatggtggccctccgtgtcagggtttt
tctgggatgaacagattcaatcaaagtccctggagcaaagtccagtgcgagatgatctta
gcattcctgtcatttgcggagtatttccgtcctagattctttctcttagaaaatgttagg
aactttgtctcgttcaacaaaggacagaccttcagattgacactggcatcactcctggag
atgggataccaggtccgatttggaattttagaggcaggggcttatggtgttgcgcagtcc
aggaaaagggcattcatttgggccgctgcacctggagagactcttccagagtggcctgaa
ccaatgcacgtctttgctagccctgagctgaaaataactctacctgatggcaagttctac
gccgctgtcaagagcaccgctgcaggagcccctttccgctcaattacagttcgagataca
attggggatctaccagctgtggaaaatggcgccggcaaaccaacaattcagtacggaagc
ggtcctgtgtcttggttccagaagaagattagaagcgacatggcttcactgaatgaccac
atatctaaagagatgaatgagctgaacctcataagatgcaagcacattccaaagcgccca
ggttgcgactggcatgacctgccagatgaaaaggtgaagctgtccacagggcagatggtg
gacttgatcccttggtgcttgcccaacacagccaaaaggcacaatcagtggaaaggactg
tacggtaggttggactgggagggcaatttccccacttctgtaacggatcctcagccaatg
gggaaggtcggcatgtgcttccatcctgagcaggacaggatcattactgtccgtgaatgt
gctcgatcccagggcttccccgatagctaccgtttcgctggcaacatccagaacaagcac
aggcagatcgggaatgccgtgccaccgccccttgcctatgccctcgggaggaagctcaag
caagccatcgacgccaagcgttga |
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